Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g0153 ATGGCTCCAAGCTCTGTTGTGATCACAATCGAGAAACATAACAACTTACCTTTACTGGAAATCAATGGCTCTGATTCTTTGTTGCTTCCAGAGAAGCACAAAGCCGCCAGTCCCAAGCAACTCACTTGGGTTCTTCTTCTCAAAGCTCACAAAGCTCTGTTTTTCTTCTCGTGGTTGGCTATGGCTGTAAAGACTCTGTTTGCTTCTGTTAAGAAACGCATTGCTAATGCGGATATCAACAAAGAGGATTCGAAAAGCCGAGGGAAGTTGTATGGGTTCATTAAGGCTTTTCTTGCGATTTCGATTGCGGGTTTGATTGTTGAAATTGTTGCCCATTTCAAGAACTGGAATCTGGGAATGATTCAGGTTCATGGGGTTGTTCAATGGCTTTTTGTCTCGTGGCTTTCGTTTCGAGTTGATTACATTGCTCCACTTGTGTTGATGCTTTCTAAATTCTGCATTGTTCTGTTCTTGATCCAATCTCTTGATCGTTTTGTTCTCTGTGTCGGCTGCTTTTGGATCAAGTTTAAGAAAATCAAACCCATGATTCGTGATGATGTTTATGATTTGGATGATGCTTCTACTTTTCCTATGGTTCTTGTTCAAATCCCAATGTGTAATGAAAGAGAGGTTTATGCGCAATCGATTGCTGCGGCGTGTGAGCTCGATTGGCCGAGGAATCGGATTTTGATTCAAGTTCTTGATGATTCTGATGATGGAAATCTTCAGGGTTTGATCAAGGAAGAAGTTCTATCATGGAATGAAAAGGGTGTTAATATTGTTTATAGACATAGATTGATCCGAACTGGATATAAAGCTGGGAATCTGAAGTCTGCTATGGCTTGTGATTATGTTAAAGATTATGAGTTTGTAGCTATTTTAGATGCAGATTTCCAGCCCAATCCTGATTTTCTTAAACTTACTGTTCCCCACTTTAAGGGAAATCCGCAACTTGGTCTCGTTCAAGCTCGATGGGCGTTCGTTAATAAGGAGGAAAACTTACTCACAAGACTCCAAAACATCAACTTGTGCTTCCATTTTGAAGTGGAGCAGCAAGTGAATGGGCTTTTCCTGAACTTCTTTGGATTCAATGGAACGGCAGGCGTTTGGAGAGCAGAAGCACTTGAGGAATCCGGTGGCTGGCTCGAGCGAACGACTGTGGAAGATATGGATATCGCAGTTCGAGCACACTTGAAGGGATGGAAATTCATCTTCCTCAATGATGTCAAGGTGCTTTGTGAATTGCCTGAATCATATGAAGCTTACAAGAAACAGCAACACCGTTGGCATTCTGGTCCAATGCAGCTCTTCAGATTATGCCTTCCTTCTATCATTACTTCAAAGATATCGATATGGAAGAAGACCAACTTGATATTCCTGTTCTTTCTCTTGAGAAAACTTATCCTTCCATTTTACTCATTCACTTTGTTTTGCATCATACTTCCATTGACAATGTTTATTCCAGAAGCAGAATTGCCTCTTTGGGTAATCTGCTACATCCCAGTCTTCATGTCCTTGCTAAACATTCTTCCATCCCCCAAATCCTTCCCATTCTTGATCCCATACCTCTTGTTCGAGAACACCATGTCTGTCACGAAGTTCAACGCCATGGTTTCCGGGCTATTCCAGCTCGGAAGTTCGTACGAATGGATCGTGACAAAGAAGACGGGGCGATCATCCGAATCCGACTTCTTAGCATTAGCCGAGCGAGAATCGAAAACTACGAATGAGGAGAAGATTCTGAGGAGACATTCGGAGTCGGGGTTGGAGTTGTTGAGTAAATTGAACCAACAAGAGAAGCAAATGGCTTCAAAGAAGAAGAGAAACAAGGTGTATAGAAAAGAACTTGCTCTTGCTTTTCTGCTGCTAACTGCATCAGCTAGAAGCTTCTTATCAGCACATGGAATTCACTTCTATTTCTTGCTTTTTCAAGGTTTGTCATTCCTGGTAGTGGGTTTGGACTTGATTGGGGAGCAAATGAACTGA 1986 41.89 MAPSSVVITIEKHNNLPLLEINGSDSLLLPEKHKAASPKQLTWVLLLKAHKALFFFSWLAMAVKTLFASVKKRIANADINKEDSKSRGKLYGFIKAFLAISIAGLIVEIVAHFKNWNLGMIQVHGVVQWLFVSWLSFRVDYIAPLVLMLSKFCIVLFLIQSLDRFVLCVGCFWIKFKKIKPMIRDDVYDLDDASTFPMVLVQIPMCNEREVYAQSIAAACELDWPRNRILIQVLDDSDDGNLQGLIKEEVLSWNEKGVNIVYRHRLIRTGYKAGNLKSAMACDYVKDYEFVAILDADFQPNPDFLKLTVPHFKGNPQLGLVQARWAFVNKEENLLTRLQNINLCFHFEVEQQVNGLFLNFFGFNGTAGVWRAEALEESGGWLERTTVEDMDIAVRAHLKGWKFIFLNDVKVLCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIITSKISIWKKTNLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPLWVICYIPVFMSLLNILPSPKSFPFLIPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKTGRSSESDFLALAERESKTTNEEKILRRHSESGLELLSKLNQQEKQMASKKKRNKVYRKELALAFLLLTASARSFLSAHGIHFYFLLFQGLSFLVVGLDLIGEQMN 661
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 945109 947968 - Sed0019649.1 Sed03g0153 705640
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed03g0153 661 SUPERFAMILY Nucleotide-diphospho-sugar transferases 199 499 IPR029044 -
Sed03g0153 661 Coils Coil 595 615 - -
Sed03g0153 661 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 190 416 IPR029044 -
Sed03g0153 661 FunFam probable xyloglucan glycosyltransferase 5 191 415 - -
Sed03g0153 661 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 120 660 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Sed03g0153 661 Pfam Glycosyl transferase family group 2 291 497 IPR001173 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0153 Sed-Chr3:945109 Sed11g1870 Sed-Chr11:33295111 1.90E-245 dispersed
Sed13g2106 Sed-Chr13:25730419 Sed03g0153 Sed-Chr3:945109 1.30E-271 transposed
Sed11g1949 Sed-Chr11:33794837 Sed03g0153 Sed-Chr3:945109 0.00E+00 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g0153 K20887 - csv:101208151 1190.64