Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g0269 ATGGCTTTGGCAATGGCGATTCTTGCTCTGTTCTTGATACTCTGTTTCTGCTCTGCTTTGCTTCTATGGAATCAGCTTCGTTACAGAAGAAAAGGGCTGCCTCCTGGTACAATGGGATGGCCTGTTTTTGGTGAAACCACTGAGTTTCTCAAACAAGGTCCTAACTTTATGAAATCCCAAAGAGCAAGGTATGGGAGTATTTTCAAGTCTCATATTTTGGGGTGTCCTACGATTGTTTGTATGGATCCTGAGGTTAATCGATATGTTTTGATGAATGAATCAAAAGGGATTGTCCCTGGCTACCCTCAATCCATGCTCGACATCCTCGGAAAATGTAATATCGCCGCCGTCCACGGCGGTGCTCACAAGCTATTGAGAGGTGCTCTGCTTGCTGTTGTTAGTCCTGCCATGATTAGAGATCGAATTCTTCCTAAAGTTGATGACTTTATGCGATCCCATTTGAGGAATTGGGATCAACAAATCATTGACATTCAAGAGAAGACCAAAGAGGTGAACTTTATAAAAAAGAATTCTCATTTTTGTTGCAATGATAGAGTTGAACTTGATAACTTCCTCTGTTTTTTTCTTCAGATGGCTCTTCGATCGTCTATGAAGCAGATTGCTGGAATCGAGTCCGGTCCTTTATCGCAATCGTTCGTCCCGGAGTTCTTTAACCTTGTTCTCGGCACCCTCTCGCTCCCTATCGATCTCCCCGGCACTAACTACCGCCGAGGAATCCAGGCAAGGAAGAACATAATAAAACTGTTGCAGCAGCTGATAAATGAGAGAAGAGCCTCAGGGACACAAAAAGATGACATGCTTGGATATTTCTTGAGTGATGAGAACAAATATAAGATGAATGATGAAGAGATGATTGATCAAATCATTACTGTTTTGTACTCTGGCTATGAAACTGTTTCTACAACTTCAATGATGGCTGTCAAGTTTCTCCATGATCATCCAGAAGTTCTTCAGCAACTCAGAAAAGAGCATTTGGCAATTAGGGAAAAGAAAAATCCTGAGGACCCCATTGATTGGAATGATCTTAAAGCCATGAAGTTCACACGTGCGGTGATATTTGAATCATCAAGGCTGGCCACAATTGTTAATGGGGTTTTGAGAAAAACTACAAAGGACATGGAACTAAATGGTGAGTTTCATGTAAATAAATAA 1173 41.43 MALAMAILALFLILCFCSALLLWNQLRYRRKGLPPGTMGWPVFGETTEFLKQGPNFMKSQRARYGSIFKSHILGCPTIVCMDPEVNRYVLMNESKGIVPGYPQSMLDILGKCNIAAVHGGAHKLLRGALLAVVSPAMIRDRILPKVDDFMRSHLRNWDQQIIDIQEKTKEVNFIKKNSHFCCNDRVELDNFLCFFLQMALRSSMKQIAGIESGPLSQSFVPEFFNLVLGTLSLPIDLPGTNYRRGIQARKNIIKLLQQLINERRASGTQKDDMLGYFLSDENKYKMNDEEMIDQIITVLYSGYETVSTTSMMAVKFLHDHPEVLQQLRKEHLAIREKKNPEDPIDWNDLKAMKFTRAVIFESSRLATIVNGVLRKTTKDMELNGEFHVNK 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1648533 1650566 + Sed0013203.2 Sed03g0269 705756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g0269 390 Gene3D Cytochrome P450 24 390 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0269 390 SUPERFAMILY Cytochrome P450 26 389 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0269 390 PANTHER CYTOCHROME P450 26 33 383 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Sed03g0269 390 Pfam Cytochrome P450 34 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0269 Sed-Chr3:1648533 Sed11g2058 Sed-Chr11:34570422 1.70E-185 dispersed
Sed03g0268 Sed-Chr3:1648533 Sed03g0269 Sed-Chr3:1648533 2.00E-204 tandem
Sed03g0269 Sed-Chr3:1648533 Sed03g0270 Sed-Chr3:1648533 8.50E-201 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g0269 K09590 - csv:101206858 612.068