Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed03g0307 | ATGGCGGTTCCGGCGGTTCAGTTCCCGATCTTCGCGGCTGTCAGATTGCTCGGAATGATTGTGGCATCTCTTGTCTTCATTTGGACCTTGCACTTCCGTGGGGGATTGGCGCTCATCTCAGATAACAAGGATCTCATCTTCAATGTCCATCCTGTTCTTATGGTGGTTGGGCTTATACTTCTCAATGGTGAAGCAATGATGGCATACAAGACAGTTTCAGGAACCAAAAACTTCAGAAAGCTAGTTCATCTTGCAGTACAGTTTGTTGCATTATGTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTCCACAACGACAAAGGAATCGACAACTTTTACAGTCTGCATTCATGGTTGGGCCTAGTTTCTATCTTTCTGTTCGGCATCCAGTGGACTGCGGGATTTGTTACCTTTTGGTACCCAGGTGGCTCGAGAAACAGCAGAGCTACTTTATTACCTTGGCATGTTTTCCTTGGCGTTTACATATATGGCCTTTCCATTGCTACAGCTGTTACTGGTTTGTTAGAAAAAGCTACATTCCTTCAAGTCAGCAAGGTAATTTTACGCTATTCGAACGAGGCTTTGCTGATTAATTCATTGGGTATCCTCATTGTTCTTTTGGGTGGTCTCGTAATTCTTGCGGTTATCGCTCCGTCGAGCGGCAAAGGGGACATTTACAAAGGGATGACAGAATAG | 699 | 45.06 | MAVPAVQFPIFAAVRLLGMIVASLVFIWTLHFRGGLALISDNKDLIFNVHPVLMVVGLILLNGEAMMAYKTVSGTKNFRKLVHLAVQFVALCLSLIGIWAALKFHNDKGIDNFYSLHSWLGLVSIFLFGIQWTAGFVTFWYPGGSRNSRATLLPWHVFLGVYIYGLSIATAVTGLLEKATFLQVSKVILRYSNEALLINSLGILIVLLGGLVILAVIAPSSGKGDIYKGMTE | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 1853501 | 1856985 | + | Sed0002693.1 | Sed03g0307 | 705794 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed03g0307 | 232 | Gene3D | - | 2 | 229 | - | - | |
| Sed03g0307 | 232 | PANTHER | CYTOCHROME B561-RELATED | 1 | 221 | IPR043205 | GO:0016491(PANTHER)|GO:0016491(InterPro) | |
| Sed03g0307 | 232 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Sed03g0307 | 232 | FunFam | Cytochrome b reductase 1 | 4 | 225 | - | - | |
| Sed03g0307 | 232 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Sed03g0307 | 232 | CDD | Cyt_b561_ACYB-1_like | 40 | 183 | - | - | |
| Sed03g0307 | 232 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 217 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed03g0307 | Sed-Chr3:1853501 | Sed06g1856 | Sed-Chr6:42955268 | 1.40E-44 | dispersed | |
| Sed01g3590 | Sed-Chr1:64986070 | Sed03g0307 | Sed-Chr3:1853501 | 5.50E-54 | transposed | |
| Sed06g0214 | Sed-Chr6:1606728 | Sed03g0307 | Sed-Chr3:1853501 | 3.10E-46 | transposed | |
| Sed11g1476 | Sed-Chr11:30559068 | Sed03g0307 | Sed-Chr3:1853501 | 2.50E-43 | transposed | |
| Sed11g2091 | Sed-Chr11:34837002 | Sed03g0307 | Sed-Chr3:1853501 | 1.20E-101 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed03g0307 | K08360 | - | csv:101212633 | 386.726 |