Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g0404 ATGGCTAAGTTCAGGGATAGGACTGAGGATTTTAAAGATGCTGTGCGGCATTGTGCTACTTCTTTAGAGTATAGCGAGTCCAAGTTGGCGGCTATCATGGCGTCTTTCATCATTCACAAACCTCGGCAAAGGTCACCTTTCATCAAAGCTGCTCTAAAAACGCTTGAAAGCATTGACGCTCTTGAAGGGTTTATGTTGAAACATCAAAAGGACTATGTTGATTTGTATCGGACGACAGATCAAGAGAGAGACAATATTGAACACGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAAATAGATATCCTAAAAAACAACATTAATGAGGACGAAGCACACTCAAAGGGTTGGCTTGGTGCTAGGACTGATGATGCTAATGCCGATACTATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTCCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGATTTCAAGATATCATAAACAAAGCAGTACCAAGAAGAAAACCAAACCAAGTAACTAAACCACGTTCTGCAACCCCTGAATATAATAATAATAATATGGAGCCGAGGGAACCTGATAATTTTGAGCATCAACCTGGCCGAGCCCAACAGCAACTGTTGGATGATGAAACTCGTGCACTTCAGGTTGAGTTGACTGGTCTTCTCGACGCAGTCCAGGAAACTGAAACTAAAATGGTAGAGATGTCTGCTTTGAATCACCTCATGTCTACACATGTTTTGCAGCAAGCACAACAAATCGAACTACTTTATGACCAGGCTGTTGAAGCCACAAAGAATGTTGAGCTCGGTAATAAAGAACTTTCCCAAGCAATTCAGCGGAATAGCAGCAGCAGAACCTTCCTTCTGCTTTTTCTATTTGTGCTCACCTTTTCAATTCTCTTTCTTGATTGGTATAGTTGA 933 41.37 MAKFRDRTEDFKDAVRHCATSLEYSESKLAAIMASFIIHKPRQRSPFIKAALKTLESIDALEGFMLKHQKDYVDLYRTTDQERDNIEHEVTAFIKACQEQIDILKNNINEDEAHSKGWLGARTDDANADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSATPEYNNNNMEPREPDNFEHQPGRAQQQLLDDETRALQVELTGLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIELLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2440020 2442796 - Sed0006926.1 Sed03g0404 705891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g0404 310 Coils Coil 94 114 - -
Sed03g0404 310 MobiDBLite consensus disorder prediction 169 207 - -
Sed03g0404 310 PANTHER SYNTAXIN-18 1 310 - GO:0005783(PANTHER)|GO:0006890(PANTHER)|GO:0031201(PANTHER)
Sed03g0404 310 Pfam SNARE-complex protein Syntaxin-18 N-terminus 5 86 IPR019529 -
Sed03g0404 310 MobiDBLite consensus disorder prediction 176 193 - -
Sed03g0404 310 SUPERFAMILY t-snare proteins 64 274 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Sed03g0404 310 Gene3D - 214 307 - -
Sed03g0404 310 FunFam Syntaxin-81 like 213 307 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g0404 K08492 - csv:101207161 530.02