Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g0408 ATGGAACAACACGTTTCTACCGCCGCCGCCTCGCCGGTTTCCGACGATGTGCGGCGGTGCTCCGGCCAGTCTAGGGCCGAGGTAGATCTGGAATGTGGGTTGGCTGAGATGAAGCTACATTTGGCCAAAATGGAAAGGGATTGCCGGATTTGTCATCTGAGTACGGATGCTTCTAATCAGGAATCTGGAATCCCCATGGAGTTGGGCTGTTCTTGTAAGGATGATTTGGCTGCTGCCCACAAGCACTCACCTGTGAAATCTGTGGACCGCAATGTTAATGGTACTTGTGAAACTGATTCCCCTGAGCAGCATAACGAGTTAAATGATGCAACGACAGCAACCACTGCAGCTACTGTCGTGGTGCCACCGCACTTTACAGTGGCTCGAAACTTCTGGCAGGGCCACAGGTTCCTGAATTTCTTGCTCGCCTGCATGGTTTTCGCATTTGTCATATCATGGCTATTTCACTTCAAAATACCCTCAAGATGA 489 50.51 MEQHVSTAAASPVSDDVRRCSGQSRAEVDLECGLAEMKLHLAKMERDCRICHLSTDASNQESGIPMELGCSCKDDLAAAHKHSPVKSVDRNVNGTCETDSPEQHNELNDATTATTAATVVVPPHFTVARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPSR 162
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 2457552 2460167 + Sed0009795.1 Sed03g0408 705895
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed03g0408 162 SMART ringv_2 47 100 IPR011016 GO:0008270(InterPro)
Sed03g0408 162 MobiDBLite consensus disorder prediction 1 20 - -
Sed03g0408 162 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 106 IPR013083 -
Sed03g0408 162 PANTHER ZINC FINGER, RING-CH-TYPE 24 82 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0408 Sed-Chr3:2457552 Sed04g1211 Sed-Chr4:25097352 1.20E-42 dispersed
Sed11g2183 Sed-Chr11:35549506 Sed03g0408 Sed-Chr3:2457552 2.50E-61 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g0408 - - - 0.0