Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g0467 ATGAGAATGCATTGTTCTCCGATCATCTTGTTCTTGATCCTCTCCTTTGTCAGCCCTCTTTCCCTTTCTTCCTTCCCCAACCTCACTCTCTCCGGCGACGCCCGTCTCCGAAACAGAGCCATTCTTCTCACTCAAGATCTCTCCTGCCTTCCCTCTTCCTCCGCCTCCGTCACCGGCGCCGGCACCGCCTTCTTCGCCCACCCCATCCGCTTTCTTGATTCCTCCACCCACTCCGCCGCCTCCTTCTCCTCCCGATTCTCCCTCTCCGTCGTCCCCACCCCTCTGTGCCCTCCCCCCGACGGCGTCGCCTTCCTCATCGCCGCCGATTCCACCTCCTTCAGCCGCTCCCCTGGCCACCTCGCCCTCCCCAACTCCCCCTTCCCTTTCCTCGCCCTCGAATTCGACACCCACTTCGACCCCTTCCTCGGCGACATCAACGACAACCATCTCGGCCTCGACCTCAACTCCCCCACCTCCCTCATCTCCGCCGACTTCGCCTCCATCGGCGTTGTTCTGAAAAATGGCCGAGAGGTTACTGTTTGGATCGAGTACTGGAATGACTCCAAGATGATCCAGGTCTGGGTTGCCTATTCCCACATTCGCCCTCTCCATCCTCTTCTGGTTTTGCAGATTGACCTCTCCAAGAACTTTGAGGAGTTTATGTTTGTGGGCTTCTCTGCCTCCAATGGGCGCGGCTCCGCTCTTCACATTGTCGACAGATGGCGGTTCACCACTTTCGGGTTAGTCCCTTCTCTGACTCCTGTTGATACCATTAATGATGGGGATTGTTTTATGTGCTCCGTCGAGAATTCGAGCCGTGTCGTTGGCACTCGCAAACGGAGGATCGCCATTTGGGAGATGACCCTTGGATTCGGTGCTTTTGTTTGCTCCCTTGTTGTTATTGCTGGTGTGGTTGGTTTTGTGTTGATGTACAAGTTGAGAGGTAGAATGTGTAGAGGCAGAGCAGTTCATGAAGCTTGTAAAGTTGAGATGAATAGAGTTCCAAAGAGATTGTCTCTTGGGGAGATTAAGTTGGCTACAATGGGGTTTAATCCAAACAGGATTCTTGGGGAAGGTGGCTCTGCAACTGTTTACAAAGGCTGTCTTTCTTCAGGTGGAGAAGTGGCGGTTAAAAGATTCGAGCGAGCCATGGGGAACGATCCTATGTGCAATCCTTTCACCACGGAGTTTGCGACAATGGCGGGGTGCTTACGACACAAGAATTTAGTTCGGTTTCATGGATGGTGCTGTGAGGCAGATGAGTTGGTGCTTGTTTATGAGTACTGTCCCAATGGAACCCTTGACAAACTTCTTCACAGGAACTCCAATTCACAATTTGTTCTTCCATGGAAGATGAGGTTTTCCATAGTGCTTGGTGTTGCTTCTGCGTTGACATACCTCCATGAGGAATGTGAGAGCCAAATCATCCACAGGGATGTCAAGACCTGCAACATTATGCTCGATGCAGAGTTCAACGCCAAACTCGGGGATTTTGGTCTAGCAGAAGTTTACGAACACAGTTCGATCACAAGAGAAGCAACTATACCAGCTGGAACGATGGGATATCTTGCACCTGAATATGTTTATTCCGGGGTTCCCACCATCAAAACCGACGTGTACAGCTTCGGTGTGGTGATGCTTGAAGTTGCATCAGGAAGGAGGCCGGTAAACGAAGATGGGACGGGGCTTGTTGATCGGATTTGGGATCTATGGGAAGTGGGGAAACTGATTGAAGCATCTGATTCAATGTTGATGGGAAAGTACAATATAGTAGAAATGGAGAGAATTCTAATGGTGGGGCTTTTATGTGTGCATCCAAATCATGAAAAGAGGCCAACTGTGAAAGAAGCTGCAAGGATTCTCAAAGGGGAAGCCTCCCTTCCTTTACTACCTTCAAAGAAACCAAGGGTCTGCATCAGGCCTGTTTTTCCTGATGATGATTCTCAAGATGTAGAAAATCATCGTGGCGAGTATCTCGGCCTCGAAGAATCAGCATGGATGACCCCCAAGAGCCAATTTAGTTAG 2025 50.57 MRMHCSPIILFLILSFVSPLSLSSFPNLTLSGDARLRNRAILLTQDLSCLPSSSASVTGAGTAFFAHPIRFLDSSTHSAASFSSRFSLSVVPTPLCPPPDGVAFLIAADSTSFSRSPGHLALPNSPFPFLALEFDTHFDPFLGDINDNHLGLDLNSPTSLISADFASIGVVLKNGREVTVWIEYWNDSKMIQVWVAYSHIRPLHPLLVLQIDLSKNFEEFMFVGFSASNGRGSALHIVDRWRFTTFGLVPSLTPVDTINDGDCFMCSVENSSRVVGTRKRRIAIWEMTLGFGAFVCSLVVIAGVVGFVLMYKLRGRMCRGRAVHEACKVEMNRVPKRLSLGEIKLATMGFNPNRILGEGGSATVYKGCLSSGGEVAVKRFERAMGNDPMCNPFTTEFATMAGCLRHKNLVRFHGWCCEADELVLVYEYCPNGTLDKLLHRNSNSQFVLPWKMRFSIVLGVASALTYLHEECESQIIHRDVKTCNIMLDAEFNAKLGDFGLAEVYEHSSITREATIPAGTMGYLAPEYVYSGVPTIKTDVYSFGVVMLEVASGRRPVNEDGTGLVDRIWDLWEVGKLIEASDSMLMGKYNIVEMERILMVGLLCVHPNHEKRPTVKEAARILKGEASLPLLPSKKPRVCIRPVFPDDDSQDVENHRGEYLGLEESAWMTPKSQFS 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2791213 2793601 - Sed0001055.1 Sed03g0467 705954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g0467 674 SUPERFAMILY Concanavalin A-like lectins/glucanases 14 247 IPR013320 -
Sed03g0467 674 Gene3D - 12 250 - -
Sed03g0467 674 FunFam L-type lectin-domain containing receptor kinase S.6 318 428 - -
Sed03g0467 674 ProSiteProfiles Protein kinase domain profile. 350 630 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed03g0467 674 SMART serkin_6 350 620 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed03g0467 674 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524(InterPro)
Sed03g0467 674 PANTHER - 44 631 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Sed03g0467 674 CDD lectin_legume_LecRK_Arcelin_ConA 14 247 IPR001220 GO:0030246(InterPro)
Sed03g0467 674 Gene3D Phosphorylase Kinase; domain 1 315 428 - -
Sed03g0467 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed03g0467 674 Pfam Legume lectin domain 24 246 IPR001220 GO:0030246(InterPro)
Sed03g0467 674 SUPERFAMILY Protein kinase-like (PK-like) 332 621 IPR011009 -
Sed03g0467 674 Gene3D Transferase(Phosphotransferase) domain 1 429 627 - -
Sed03g0467 674 FunFam L-type lectin-domain containing receptor kinase VIII.1 429 639 - -
Sed03g0467 674 Pfam Protein kinase domain 352 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0467 Sed-Chr3:2791213 Sed03g1346 Sed-Chr3:8593281 9.10E-126 dispersed
Sed10g1721 Sed-Chr10:34204923 Sed03g0467 Sed-Chr3:2791213 2.30E-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78860 PF00069 Pkinase 2.90E-44 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g0467 - - - 0.0