Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g0544 ATGCTTTTGAAGCCATTCAACTCCGTCGCCGTCGTCTTCATGCTAGCTTTCGCATTCTTCGTCCTCTTCTTCACCGGCTTCCTCGAATTTCCACCGCCATCCACTTCCATACTACCGCCCACCGACGATCTGAATTTCTCAGCGGCTGAGTCTACACCAGAACCTTTCGCCGATTTGATCGCCGCTTTCAAGAAATGGGACTCTCAGGTCGGCTGCGATCGATTCCGGGAGAAAATCGGCGGCGGTTTGGGTAATAGGTCTTCTTCGTCTTCATCGCTGCAGCAACCTAGTTCGGAATGCGCGGGGCTGAAATTGAATCACGTTTCTGTTTTGGTGAAAGGCTGGACTTGGATTCCTGATAATTTAGAGAATTTGTATCCGTGTTCTTGCGGATTGAGCTGTCTTTGGACTAAATCTTCTGTTCTTGCCGATAAACCTGACGCCTTGTTCTTCGAGACCAGTACGCCTCCACGGCAGAGGCGCAGGGGAGATCCTCTTCGCATATATATGGATCTCGAGGCTGGTCGGAAACGCTCGGGTTTTGAGGATCTATTTGTTAGTTATCATGCAGAAGATGATGTTCAGTCAACTTATGCTGGAGCACTTTTTCACAATGGTCGAAACTATCATGTATCTTCTTCCAAAAACAACGATACGCTCGTTTATTGGTCGTCGTCCCGATGTCTTCCCCAAAGAAACCAGCTTGCTAAAAAGCTTCTAAGCTTGCTGCCTCACCATTCATTTGGCAAGTGCTTGAACAATGTAGGCGGACTCGACATGGCTCTTTCTATGTACCCTGAATGTGCAAACGATGCCAGCGTCACCCCAAAATGGTGGGATCACTTGCATTGTGCAATGTCTCAATACAAATTCGTTCTCGCGATCGAAAACACCATGACCGAGAGTTACGTTACAGAGAAGCTATTTTATGCGCTAGACTCTGGTTCGGTTCCAATTTATTTTGGTGCCCCTAATGTCTGGGACTTCATCCCTCCACATTCTATAATTGATGGGTCTAAATTCAGCTCCTTGGAAGAGTTAGCATCTTATGTAAAGCGACTTGCCAATGACCCGGTAGCTTATGCTGAGTACCATGCCTGGAGACGATGCGGTGCATTGGGTAACTATGGAAGGACCCGCGCTGCAAGCCTCGACACGCTGCCGTGCCGGGTGTGTGATGCTGTGAGTAGAAAGGGTGGTAGAAATGCTTGA 1212 48.27 MLLKPFNSVAVVFMLAFAFFVLFFTGFLEFPPPSTSILPPTDDLNFSAAESTPEPFADLIAAFKKWDSQVGCDRFREKIGGGLGNRSSSSSSLQQPSSECAGLKLNHVSVLVKGWTWIPDNLENLYPCSCGLSCLWTKSSVLADKPDALFFETSTPPRQRRRGDPLRIYMDLEAGRKRSGFEDLFVSYHAEDDVQSTYAGALFHNGRNYHVSSSKNNDTLVYWSSSRCLPQRNQLAKKLLSLLPHHSFGKCLNNVGGLDMALSMYPECANDASVTPKWWDHLHCAMSQYKFVLAIENTMTESYVTEKLFYALDSGSVPIYFGAPNVWDFIPPHSIIDGSKFSSLEELASYVKRLANDPVAYAEYHAWRRCGALGNYGRTRAASLDTLPCRVCDAVSRKGGRNA 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3356839 3360365 + Sed0027152.1 Sed03g0544 706031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g0544 403 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 106 397 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
Sed03g0544 403 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 217 398 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
Sed03g0544 403 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 95 397 - -
Sed03g0544 403 FunFam Alpha-(1,4)-fucosyltransferase 167 373 - -
Sed03g0544 403 PIRSF FucT_plant 1 403 IPR017177 -
Sed03g0544 403 Gene3D - 168 373 IPR038577 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g0544 K14412 - csv:101216230 712.99