Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g0598 ATGGCGTCCTTCTCGTTCTCCGATGACTACCACCACCAACTTCTGTTTTCACTCTCTGCATTCATCGTCTTCTTCTTCTTCTTCTTCCTCCAAAAACGCTCCTCCAAGCCACCGCTCAACCTCCCGCCGGGACCCCGCGGCTGGCCCCTCGTCGGAAACCTCTTCCAGGTCGCCCGCTCCGGCAAGTATTTCTTCGAATACGTAGAAGAAATCCGCCAGATCTACGGCCCGATCTTCACTCTCCGGATGGGCTCTCGCACCATGATCATCTTGTCCGGCGCCGACCTCGTCCACGAAGCCCTAATCAAGCGCGGCCCTACCTTCGCAAGCCGCCCGCCCGAAAACCCGACCCGAATCATCTTCAGCAGCAACAAATTCTCAGTCAACGCCGCCGTCTACGGCTCTCTCTGGCGCTCCCTCCGCCGCAACATGGTGGAGAACATGCTCTCCTCCAGTCGATTGAAGGAGTTTCGCGGCGTTCGAAAAAACGCCGTCGATAAACTCGTTCGACGCATCCGAGCCGACGCCGCCGTTAACGGCGGCGCTGTTTTGGTGTTGAAGAATGCTAGATTTGCTGTGTTTTGTATTCTCTTAGCGATGTGTTTTGGATTAGAAATGGACGAAGAATCGGTCGAGAAAATGGATCAGGTTCTTAAAACCGTTTTGAACACCGTGGATCCGAGAATCGACGATTTTCTTCCGATTCTGCGGCCGTTTTTCTCGAAACAGAGAAAACGCGCCATGGAAGTGAGAACAGAGCAGATCGATTTCATCGCACAGTTCATAAATCGAAGGAAAAAGGCAATTCAAAATCCAGGTTCGGACATTACCGCAACTTCATTTTCGTACCTCGATACGCTCTTTGATCTGAAGGTCGACGGCCGGAAATCCTCTCCGACGGAGGCGGAATTAGTGACTCTGTGCTCAGAATTCCTCAACGGCGGCGTCGACACGACCGCGACCGCAATCGAATGGGGAATCGCAGAGCTAATCGCAAACCCTAACATCCAGAACAAACTCCACGAAGAAATCAAACAATTAGTCGGCGATAGAACCGTAGAGGAATCGGATGTGGAGAAATTGCCGTACCTTCAAGCGATCGTGAAGGAATTGCTGAGAAGACATCCGCCGACGTACTTCACGCTGACGCATTCGGCGATCGAAGCGACGAAGCTCGGTGGATACGACATTCCGGTGGAGGCGAGCGTGGAGGTGTATTTGGCCGGAATCAGCAACGATCCGAGAGTGTGGAGGAATCCGGAGAGATTCGAGCCGGAGAGATTCGCCTCCGGCGAGGAGGATGTGGATCTGACAGGACTCAAAGGAATGAAGATGATTCCGTTCGGAATCGGAAGAAGAATCTGTCCAGGATTGGGAATGGCGACGATTCATGTTCATCTGATTCTGGCGAGGTTGATTCAGGAATTCGAATGGAGTTCGTATCCGGCGAACAGCAAACTGGATTTCACGAGGAAGTATGAATTTACTGTGGTGATGAAGAATCCTCTCAGAGCCATTGCAAGAACCAGAGATTAG 1536 52.15 MASFSFSDDYHHQLLFSLSAFIVFFFFFFLQKRSSKPPLNLPPGPRGWPLVGNLFQVARSGKYFFEYVEEIRQIYGPIFTLRMGSRTMIILSGADLVHEALIKRGPTFASRPPENPTRIIFSSNKFSVNAAVYGSLWRSLRRNMVENMLSSSRLKEFRGVRKNAVDKLVRRIRADAAVNGGAVLVLKNARFAVFCILLAMCFGLEMDEESVEKMDQVLKTVLNTVDPRIDDFLPILRPFFSKQRKRAMEVRTEQIDFIAQFINRRKKAIQNPGSDITATSFSYLDTLFDLKVDGRKSSPTEAELVTLCSEFLNGGVDTTATAIEWGIAELIANPNIQNKLHEEIKQLVGDRTVEESDVEKLPYLQAIVKELLRRHPPTYFTLTHSAIEATKLGGYDIPVEASVEVYLAGISNDPRVWRNPERFEPERFASGEEDVDLTGLKGMKMIPFGIGRRICPGLGMATIHVHLILARLIQEFEWSSYPANSKLDFTRKYEFTVVMKNPLRAIARTRD 511
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 3621274 3622809 - Sed0001507.1 Sed03g0598 706085
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed03g0598 511 FunFam Cytochrome P450 family protein 35 511 - -
Sed03g0598 511 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 CDD CYP77_89 74 504 - -
Sed03g0598 511 Pfam Cytochrome P450 42 500 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 23 508 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Sed03g0598 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed03g0598 511 Gene3D Cytochrome P450 35 511 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed03g0598 511 SUPERFAMILY Cytochrome P450 42 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0598 Sed-Chr3:3621274 Sed10g0618 Sed-Chr10:4117234 3.10E-126 dispersed
Sed03g0598 Sed-Chr3:3621274 Sed03g0600 Sed-Chr3:3630554 7.70E-226 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g0598 K21995 - csv:101206763 851.662