Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed03g0722 | ATGGAAGTTGAAGCACAATCAGAGTTTCCTTACTGGAAGCCTTTCCAACGGAGATTCAATCCTGATTCTCCCTTCTTCGCCTCTGGAAATGTCGAGCGCGAAATCTTAGCCAAACAGCTTGCCTTGGATTTAACCGAAGATGAAAAGCTCCAGCTACACAATATGGTGGTTGATGCCGGCAGGGAAATCTTTTGCCCAATTGTTGGTTGTGGTGCGCATTTGAAATCACTGGATGACTTTGAAGATCATTACAATTCACGGCATACTGCCTCTTGTTCAGTTTGCCCAAGAGTTTTCCCGACATCGCGACTGCTTAGTCTACACGTGTCCGAGGCGCATGACTCGTTCTTTCAAGCAAAAGTCGCTCGTGGCTATGACATGTACGAATGCCTGGTGGAAGGTTGTGGTTTAAAGTTCAAGAGCTACAAAAGCAGACATCAGCATCTAGTGGACAAGCATAAGTTTTCTGCTTCATTTGAATTCTTTAAGAAAGCTCAACCGTCCAAGAAACAAAGACACAAATTACATCGTAAACAAGTACTTCAAGAAAGGGAAGCGGCTTCGAAAATGGAAGTCGAGAATGAAACTATGGACATCCTCATTTCAGGAGTATCTAAACTAAGTACGTCAGACTCAACTCCATCGTCGGTCAGCTTTGGTCGAATGCACACTCGGGGGTTAACGTTCGTTCCTCGAGCAGTTCAGCGTGAAAAAGTGTCAGACTCCTCAACAGTAGGATCAAAGAAATAA | 750 | 44.4 | MEVEAQSEFPYWKPFQRRFNPDSPFFASGNVEREILAKQLALDLTEDEKLQLHNMVVDAGREIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVFPTSRLLSLHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRHQHLVDKHKFSASFEFFKKAQPSKKQRHKLHRKQVLQEREAASKMEVENETMDILISGVSKLSTSDSTPSSVSFGRMHTRGLTFVPRAVQREKVSDSSTVGSKK | 249 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4357041 | 4359205 | - | Sed0002550.1 | Sed03g0722 | 706209 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed03g0722 | 249 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 92 | 113 | IPR013087 | - | |
Sed03g0722 | 249 | PANTHER | UNCHARACTERIZED | 5 | 238 | IPR039258 | - | |
Sed03g0722 | 249 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 130 | 153 | IPR013087 | - | |
Sed03g0722 | 249 | SMART | c2h2final6 | 128 | 153 | IPR013087 | - | |
Sed03g0722 | 249 | SMART | c2h2final6 | 90 | 113 | IPR013087 | - | |
Sed03g0722 | 249 | SMART | c2h2final6 | 63 | 88 | IPR013087 | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
37770 | None | None | None | None | Sed | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed03g0722 | - | - | - | 0.0 |