Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g0723 ATGGGTCGCTTCAATGACAAGCTTATGGCGTTCTTGAACAATCGATGGCTGGTTTTCGTCGCTGCCATATGGATTCAGTCTTGCGCCGGTGTTGGGTATCTTTTCGGAAGCATTTCGCCGGTGATTAAGACCAATTTGAGTTACAATCAGAGGCAGGTTGCGCGTCTCGGTGTTGCTAAGGATCTTGGCGATAGCGTCGGCGTTTTGGCCGGAACTTTGTCGGAGATTTTGCCCTTTTGGGGAACTTTGTTGGTTGGTGCTATCAGTAATTTTGTGGGTTATGGTTGGCTTTGGCTCATTGTTACTGGTCGGACTCCTGTTTTGCCTCTCTGGGCCATGTGCGTCCTTGTATTTGTGGGAACGAATGGAGAGACGTACTTCAATACTGTTTCTCTGGTTTCTTGTGTACAAAACTTTCCAAAAAGCAGGGGTCCGGTGGTCGGGATTCTGAAAGGCTTTGCTGGTTTAAGTGGTGCAATTTTGACTCAGATATATGCAATCGTGCATTCTCCTGATTCAGCCAATCTTATATTCATGATAGCAGTTGGTCCTGCAATGGTGGCTATTGGTATGATGTTTTTCATCAGACCTGTCGCTGGTCATCGACAAATAAGGCCGTCCGATGGCATGAGCTTTACTAGTGTTTATGGTGTCTGCCTTCTTTTGGCTGCATATTTGATGGGAGTCATGCTTGTTGAGGATCTTGTTACCCTGAGTCCCACTGTGATAGCCATTTTTACTGCAGTTATGTTTGTCATCCTTCTTACTCCCTTTTTGATTCCTGTGACATTGGCGTTTAGCTCGGAGACGATGATATATCCTGAGCAAGAGGCTCTCCTACAGTCACCGAAACAGGAACCTGCAAGATCTGAACCATATGCTAACGAAGTGATATTTAGTGAGGTCGAGGACGAAAAATCAGAGGGAGAGGACCTACTTCCTGCATTAGAGAGACAAAAGCGCATTTCTCAGTTGCAAGCAAGGCTATTGCAAGCAGCTGCAGAAGGAGCAGTACGAGTCAAGAGGAGGAAGGGTCCTCGTAGAGGGGAAGACTTCACTTTGGGTCAAGCTTTAATCAAAGCAGACTTTTGGATTATATTTTTCTCCCTTCTCCTTGGTTCTGGAACTGGATTGACCGTGATCGATAACCTCGGACAGATGAGCCAGTCTTTAGGTTATGATAACACACATATTTTCGTATCCTTGATCAGCATATGGAACTTTCTCGGTCGTGTCGGTGGCGGGTACTTCTCTGAGATTGTTGTGAGAGATTATGCTTATCCTAGACCCATTGCTATGGCAACTGCACAATTTCTTATGATATTTGGACATGTCTTCATCGGTATGGGATGGCCCGGGGCAATGTACATTGGAACTCTCCTAACGGGGCTAGGATATGGGGCGCACTGGGCAATTGTGCCTGCTACTGCCTCTGAATTGTTTGGCCTTAAAAAATTTGGGGCTTTATACAATTTCCTGACCCTCTCAAATCCTATGGGTTCTCTGATATTTTCTGGCTTGATTGCTAGTAGTATATATGATAGTGAAGCAGAGAAGCAAGCACATAATCATCTCTCGCAGCTGCATAGCTCCCCATCTGTTTTGTTCAGCAGACTTTATGACGAGGGACCGCACTCGTGCGTCGGTGCCATATGTTTCTTTCTAACTAGTATGATGATGGCTGGATTATGTGCTATCGCAGGCATATTAAGTTTGATTTTGGTGTATCGGACGAAGGGGGTTTACAACAACCTCTATGGAAAATCCCGTGCTTCGACGCTTTCGTAG 1788 45.64 MGRFNDKLMAFLNNRWLVFVAAIWIQSCAGVGYLFGSISPVIKTNLSYNQRQVARLGVAKDLGDSVGVLAGTLSEILPFWGTLLVGAISNFVGYGWLWLIVTGRTPVLPLWAMCVLVFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIVHSPDSANLIFMIAVGPAMVAIGMMFFIRPVAGHRQIRPSDGMSFTSVYGVCLLLAAYLMGVMLVEDLVTLSPTVIAIFTAVMFVILLTPFLIPVTLAFSSETMIYPEQEALLQSPKQEPARSEPYANEVIFSEVEDEKSEGEDLLPALERQKRISQLQARLLQAAAEGAVRVKRRKGPRRGEDFTLGQALIKADFWIIFFSLLLGSGTGLTVIDNLGQMSQSLGYDNTHIFVSLISIWNFLGRVGGGYFSEIVVRDYAYPRPIAMATAQFLMIFGHVFIGMGWPGAMYIGTLLTGLGYGAHWAIVPATASELFGLKKFGALYNFLTLSNPMGSLIFSGLIASSIYDSEAEKQAHNHLSQLHSSPSVLFSRLYDEGPHSCVGAICFFLTSMMMAGLCAIAGILSLILVYRTKGVYNNLYGKSRASTLS 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4360226 4363436 - Sed0002384.1 Sed03g0723 706210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g0723 595 Pfam Nodulin-like 15 262 IPR010658 -
Sed03g0723 595 CDD MFS_Mch1p_like 15 567 - -
Sed03g0723 595 Gene3D MFS general substrate transporter like domains 359 581 IPR036259 -
Sed03g0723 595 SUPERFAMILY MFS general substrate transporter 212 581 IPR036259 -
Sed03g0723 595 SUPERFAMILY MFS general substrate transporter 9 202 IPR036259 -
Sed03g0723 595 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Sed03g0723 595 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 583 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0204 Sed-Chr1:1615772 Sed03g0723 Sed-Chr3:4360226 1.50E-89 dispersed
Sed03g0723 Sed-Chr3:4360226 Sed05g1417 Sed-Chr5:27577275 1.90E-95 dispersed
Sed04g2138 Sed-Chr4:35581231 Sed03g0723 Sed-Chr3:4360226 4.10E-34 transposed
Sed11g2265 Sed-Chr11:35903390 Sed03g0723 Sed-Chr3:4360226 0.00E+00 transposed
Sed01g2884 Sed-Chr1:24515583 Sed03g0723 Sed-Chr3:4360226 3.10E-77 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g0723 - - - 0.0