Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g0798 ATGATGTGTGTGAATTCCAATATTATGAGTAAGTTGAAGCCTTATATTCTAGTGGTGAGCCTACAATTTGGAATAGCTGGTATATATGTAATATCCATGGCTACTCTTAGCCAAGGCATGAGTCGCTATGTCTTGATCGTGTATCGAAACGCCGTCGCCGCTCTCTTTCTTGCTCCCTTCGCTCTATTCTTCGAAAGGAAAAGAAGGCCAAAGATGACACTCACAGTCGCTTTGCAAATCATGGCCTTGGGATTTCTAGAGCCGGTTATCGATCAGGGATTCGGTTATTTGGGAATGTCGTATACGTCGGCGTCATTTACTTCGGCCATCATGAACGCTGTCCCATCTATTACCTTCATCATTGCAGTCATTTTTCGCGAAGGTAATTGGAACTTTGGTGACATTTGGCGGAGCTTTGGTTATGACACTTTACAAAGGACCAATTTTGGATTTTTTTGGACTCGAAAATCCAACCACCACGTTAGCGGCGGCACCGCCGCCAATCAGCACTGGGCCGCCGGAACTTTGTTCATCCTTCTCGCTTGCGTGGCTTGGTCTTGTTTCTATGTATTACAGTCTATAACGGTGAAGAGATATCCAGCAGAGCTGTCACTTTCGGCATTGATATGCTTGGCTGGTGCAGTTCAAAGCACAGTAATAGCAGTAGCCATAGAGCATCGAGCTAGTGCGTGGGCGGTCGGCTGGGACTCCAGGCTTCTGGCTCCTCTCTATACGGGAATAGTTGGGTCTGGAATTGCATATTACTTCCAAGCTTTGGTTATGAAGACCAGAGGCCCCGTATTTGTAACGGCTTTCAACCCTTTATGTATGGTTGTTGTCACTATAATTTCCTCCATTATTCTCGCCGAGAAGATCCATCTTGGAAGTGTTATTGGAGCCATTATCATCTCACTTGGGCTTTATTCGGTTGTTTGGGGCAAAAGCAAGGATTATTCCACCGCCGCCGGCCACCATCCTAAGCCTAGCGCTGCCGTGCCGGAGCTCCCAATTACGGCCACGAAACTCGCCGCTGAACAAGAAGCTCGTGATCATCAGCCTCCAAAATGA 1068 47.19 MMCVNSNIMSKLKPYILVVSLQFGIAGIYVISMATLSQGMSRYVLIVYRNAVAALFLAPFALFFERKRRPKMTLTVALQIMALGFLEPVIDQGFGYLGMSYTSASFTSAIMNAVPSITFIIAVIFREGNWNFGDIWRSFGYDTLQRTNFGFFWTRKSNHHVSGGTAANQHWAAGTLFILLACVAWSCFYVLQSITVKRYPAELSLSALICLAGAVQSTVIAVAIEHRASAWAVGWDSRLLAPLYTGIVGSGIAYYFQALVMKTRGPVFVTAFNPLCMVVVTIISSIILAEKIHLGSVIGAIIISLGLYSVVWGKSKDYSTAAGHHPKPSAAVPELPITATKLAAEQEARDHQPPK 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4809533 4813963 - Sed0017702.1 Sed03g0798 706285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g0798 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 125 - -
Sed03g0798 355 Pfam EamA-like transporter family 174 311 IPR000620 GO:0016020(InterPro)
Sed03g0798 355 Pfam EamA-like transporter family 24 126 IPR000620 GO:0016020(InterPro)
Sed03g0798 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 315 - -
Sed03g0798 355 PANTHER WAT1-RELATED PROTEIN 16 324 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0798 Sed-Chr3:4809533 Sed05g2352 Sed-Chr5:35994836 1.70E-86 dispersed
Sed01g3128 Sed-Chr1:43824645 Sed03g0798 Sed-Chr3:4809533 6.10E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g0798 - - - 0.0