Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g0911 ATGTCTAAAGAGGAGGTTATAATTTTGGATTGTATCCTAAGTCCATTTTGCACTAGGGTTAAGATTGCTTTGAATGAGAAGGGAGTGATTTATGAGAGTAGAGAGGAGGATTTGTTTGGTTTGAAAGGTGGGAAAAGTGAGTTGTTGCTCAAATCTAACCCTATTCATAAGAAAGTGCCTGTTCTCTTGCATAATGGCAAGCCAGTCAATGAAAGCTCCAACATTGTAACCTACATTGATGAGGGTTGGCCTTCTTCTTCTCCTCTTCTTCCTTCCTCGCCCTACGAAAGAGCTCAAGCTCGGTTTTTGATCGACTACATCGATAAAAAGGTATTTGAGGTAGGTGGGAAGATTTGGAAGAGCAATGGAGAAGAGCAAGAGGCAGCCAAGAAGGAGTTCATAGAGATTTTGAAATATTTGGAGGAAGCTTTAGGGGACAAAGATTTCTTTGGAGGAGAAAGCTTTGGGATTGTGGATGTGATTGCAATCCCATTCACAAGTTGGTTCTATGCTTTTGAGAAAGTTGGAAGCTTCAAAGTGGAAGAACATTGCCCTAAATTCTCAGCTTGGGAAAAGAGGTGTTTGCTTAAGGACACTGTTTCTAGTGTCATCCCTAGCCCTCAAAAGGTCTATGAGTTTGTCACCTCCATGAGAAAGAAATTTGGGCTTGAATAG 675 41.19 MSKEEVIILDCILSPFCTRVKIALNEKGVIYESREEDLFGLKGGKSELLLKSNPIHKKVPVLLHNGKPVNESSNIVTYIDEGWPSSSPLLPSSPYERAQARFLIDYIDKKVFEVGGKIWKSNGEEQEAAKKEFIEILKYLEEALGDKDFFGGESFGIVDVIAIPFTSWFYAFEKVGSFKVEEHCPKFSAWEKRCLLKDTVSSVIPSPQKVYEFVTSMRKKFGLE 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5617202 5618847 + Sed0010899.1 Sed03g0911 706398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g0911 224 CDD GST_N_Tau 6 83 - -
Sed03g0911 224 Pfam Glutathione S-transferase, C-terminal domain 122 194 IPR004046 -
Sed03g0911 224 FunFam Glutathione S-transferase U20 93 224 - -
Sed03g0911 224 CDD GST_C_Tau 95 217 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Sed03g0911 224 SUPERFAMILY GST C-terminal domain-like 81 221 IPR036282 -
Sed03g0911 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 213 IPR010987 -
Sed03g0911 224 SFLD Main.3: Omega- and Tau-like 2 222 IPR045073 -
Sed03g0911 224 Pfam Glutathione S-transferase, N-terminal domain 13 81 IPR004045 -
Sed03g0911 224 Gene3D Glutaredoxin 2 92 - -
Sed03g0911 224 Gene3D - 93 224 - -
Sed03g0911 224 FunFam Tau class glutathione S-transferase 1 92 - -
Sed03g0911 224 SUPERFAMILY Thioredoxin-like 12 111 IPR036249 -
Sed03g0911 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 87 IPR004045 -
Sed03g0911 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 215 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Sed03g0911 224 SFLD Main (cytGST) 2 222 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0911 Sed-Chr3:5617202 Sed07g0887 Sed-Chr7:6397936 2.20E-60 dispersed
Sed03g0911 Sed-Chr3:5617202 Sed07g0886 Sed-Chr7:6394236 1.30E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g0911 K00799 - csv:101213628 380.948