Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g0982 ATGGCGATCTCTGAGAAAATCTCCGGCCAGTCCCTGATCCCGATGATTCCCGCCCCGAGTGAGCCGCCACCTACGACGATCGATTTCTTGGCCGCTTGCTTTGAAGGTGGAGCTCTCAGCTGGTGTCTCACGCATTTGTCTTTTACTCCTCTCGATTTAACTAAACTCAATATGCAGAAATACAAAAGCATTTGGTCTGGTCTTGGAGTTGTGTTTAAGGTGCAGGGTGTGTGGGGTTTGTTTAGAGGGTCGGTGCGTGCCCTAGTTACCTGCCCTGAGTTCTTCAAGAAGGATTACTCTGATTTTGCCGGACCTGAGTTCGCAGCTAAGTACAACACCTTGATCTACCACGCTAGCTCTGCTTCTTCTCAGGTGGTTGCCATTTTCTTGTCTTGCCAATTCGAACTTGAAACTATGGTGAATGATATAAATGAATTTCCCATGTGGACTATGCTGGTCTCTTTGTTGTTGGATTCCTTATGGAAACTTATACTTGTGCAGTACACAATGTTGCAGTTTGCTTCCTTTGAGACAATGGTGGAGATGCTATACAAGAATGTGATTCCCACACCCAAGAAGCAGTGCAGCAATTCCGTTCAGCTTGGTGTTAGTGTTGCTGGTGGATATGTGGCTGGTGTTTTCTCTGCTATTGTGTCTCATCCTGCTGATAATCTCGTTTCCTTACTCGATAATGCCAAACCAGCAACTGTCGGATTTTGGGGTCTCTTCACCCATGGTCTACCCCTCCTTATCGCTATAATTGGAACTCTTTCTGGTGCTCAATGGGGTATTTACGATGCATTCAAATTATATGTTGGACTGCCTACTAGTGGTGGTGTTGCTCATGCTGCTGTTGAACTTTAA 864 45.83 MAISEKISGQSLIPMIPAPSEPPPTTIDFLAACFEGGALSWCLTHLSFTPLDLTKLNMQKYKSIWSGLGVVFKVQGVWGLFRGSVRALVTCPEFFKKDYSDFAGPEFAAKYNTLIYHASSASSQVVAIFLSCQFELETMVNDINEFPMWTMLVSLLLDSLWKLILVQYTMLQFASFETMVEMLYKNVIPTPKKQCSNSVQLGVSVAGGYVAGVFSAIVSHPADNLVSLLDNAKPATVGFWGLFTHGLPLLIAIIGTLSGAQWGIYDAFKLYVGLPTSGGVAHAAVEL 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6080799 6082879 - Sed0024154.1 Sed03g0982 706469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g0982 287 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 111 IPR018108 -
Sed03g0982 287 Gene3D Mitochondrial carrier domain 8 274 IPR023395 -
Sed03g0982 287 SUPERFAMILY Mitochondrial carrier 32 267 IPR023395 -
Sed03g0982 287 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 25 135 IPR044677 GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0982 Sed-Chr3:6080799 Sed11g1566 Sed-Chr11:31211942 1.80E-75 dispersed
Sed03g0981 Sed-Chr3:6075427 Sed03g0982 Sed-Chr3:6080799 1.00E-75 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g0982 K15102 - rcu:8273124 281.567