Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed03g0999 | ATGCCAGACGTGCAAACCCTAGTGAGTGATTTCGTTATCAAGCTTAAGAAACGTAAAATTGAGGGCTCCTTGGCCACCGCGAAGCTTACGGCTGAATTGCTTCGTTCTGTCATTTCTCAGCAGCGAATACCCTACACCAATCAGGCGGCTGCTTTGATTGAGGCCGTGAAAGCTGTTGGCGAGCAGCTGATTGCTGCCAATCCTGTTGAGCTTGCCGTGGGTAATATTGTGAGGCGTGTTTTGCATATTATTAGAGAGGAGAATCTCTCTCTCACCACAGCTTCAATTGGTGGGTTGAGCTTAGCAGCAGTTAGTGATGATGAAGATGATGTTGAAAAAGATGATCACCCAGCCCTCTCAGCCGCTGCTGTTGCAGCTGCTGCAAGAAGTACTTTGCGGCCACCTTCACTGCAAACTCTTCTTGAGGATGTTCCTAATCAAGCATCTGTTCGTCAAACTTCATCATCTGGAGGTGATTCAGAAGGAAAGAGCAAATCTGCTGATAAAAATTCAAGGAGTCGGAAACTGAAGCATGATGTAATTGAAGCTGTTAATGAACTTATTCAGGATATTGCTACTTGTCACGAACAGATTGCTGAGCAAGCAGTGGAGCACATCCATCAAAATGAGGTGATATTAACTCTGGGGAGTTCCAGAACAGTATTGGAATTTCTTTGTGCTGCTAAGGAGAAGAAAAGGTCCTTCCGGGTGTTTGTTGCTGAGGGTGCTCCAAGATATCAGGGTCATCTTCTTGCTAAGGAGTTGGTTTCAAGAGGTTTACAGACTACACTTATTACTGATTCTGCAGTTTTTGCCATGATCTCCCGAGTGAATATGGTAATAGTTGGAGCTCATGCTGTCATGGCGAATGGTGGTGTCATGGCACCTGTCGGTTTGAATATGGTTGCCCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTTGTACTAGCTGGAAGTCACAAGGTGATGTCATGA | 975 | 45.33 | MPDVQTLVSDFVIKLKKRKIEGSLATAKLTAELLRSVISQQRIPYTNQAAALIEAVKAVGEQLIAANPVELAVGNIVRRVLHIIREENLSLTTASIGGLSLAAVSDDEDDVEKDDHPALSAAAVAAAARSTLRPPSLQTLLEDVPNQASVRQTSSSGGDSEGKSKSADKNSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVSRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVMAPVGLNMVALAAKRHAVPFVVLAGSHKVMS | 324 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 6113805 | 6122355 | - | Sed0003663.2 | Sed03g0999 | 706486 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed03g0999 | 324 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA | 3 | 322 | IPR051855 | GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER) | |
Sed03g0999 | 324 | MobiDBLite | consensus disorder prediction | 140 | 176 | - | - | |
Sed03g0999 | 324 | MobiDBLite | consensus disorder prediction | 162 | 176 | - | - | |
Sed03g0999 | 324 | MobiDBLite | consensus disorder prediction | 140 | 161 | - | - | |
Sed03g0999 | 324 | Pfam | Initiation factor 2 subunit family | 19 | 322 | IPR000649 | GO:0044237(InterPro) | |
Sed03g0999 | 324 | Gene3D | - | 194 | 324 | IPR042529 | - | |
Sed03g0999 | 324 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 5 | 322 | IPR037171 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g0999 | Sed-Chr3:6113805 | Sed11g1560 | Sed-Chr11:31190041 | 8.20E-149 | dispersed | |
Sed03g0998 | Sed-Chr3:6113805 | Sed03g0999 | Sed-Chr3:6113805 | 5.80E-163 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed03g0999 | K03754 | - | csv:101220366 | 541.191 |