Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g1335 ATGAGTTTCCAACTGAAAACTTTTATTTTGCTTCATCTTGTGCAGTCTTATATTGTCTACTTGGGATCACATTCTCATGGGTTGCATCCTTCTCCGGCCAGTCTCCGAATCGCATCTGAATCGCACTACAGTTTACTCGGGTCAATGTTAGGAAGCAATGAGGAAGCTAAGGAAGCAATTTTCTACTCCTACAACAGACATATCAATGGCTTTGCAGCCATTCTTGATCAGAATGTTGCAGAGGATCTAGCAAAACATCCTGGTGTTGTATCGGTCAATGAGAACAAGGGAAGAAAACTGCACACGACAAGTTCGTGGAGATTTCTTGGAGTCGAAAACGATGATGGAATTCCTGCAAACTCTATTTGGAACCTTGCAAGTTTTGGTGAATCTACAATCATTGCCAACCTTGACACAGGCGTTTGGCCAGAATCAAAGAGCTTCAGTGATGAAGGATATGGACCTATCCCAACAAAGTGGAAGGGAAGTTGTGAGGGTGGCTCAAAATTTCATTGCAACAGGAAGCTGATTGGAGCAAGATATTTCAACAAAGGTTATGAAGCCATTGTTGGATCCCTCAATGCGAGCTACGAAACCGCAAGGGACGACGACGGCCATGGAACACACACTTTATCCACAGCTGGAGGCAATTTCATTTCAGGAGCTAACGTTTTTGGGAATGGTAATGGCACTGCAAAAGGTGGTTCTCCAAAAGCCAGAGTTGTTGCCTATAAGGTATGCTGGCCTCAACAGTCCTCCGGGGGTGGATGTTTCGATGCTGACATTCTAGCTGCCATTGAAGCTGCAATTAGTGATGGCGTTGACGTTCTCTCGCTTTCACTCGGTGGAAATTCCAAGGAATTTCTCGACGATGTAACCGCAATAGGGGCCTTCCATGCATTTCAAAACGGTATTGTCGTCGTTTGTTCTGCTGGAAACTCAGGCCCAGCTCTAGGGACTGTAGAAAATGTGGCACCATGGCTTGTAACTGTGGCTGCTAGCACAATCAACAGAGAGTTTACTAATTATTTGGCTCTTGGAAACCAGAAGCATGTCAAGGGTGCAAGTCTTTCTGATAAAATATTGCCAACTCAGAAGTTCTATCCATTGATCAATGCTGCAGATGCAAAAGCCAATAACGTCTCCGCCGATGACGCCCGACTATGTCAGGATGGGATGCTTGATCCTGAAGAGGTAAAAGGGAAGATTATTGTTTGCCTTAGAGGAGAAAATGGAAGAGTCGACAAGGGTTATGCGGCTGCTCAAGCCGGTGCTGTCGGGATGATTCTTGCTAACACTGAACAAAATGGGGATGAACTTATGGCTGATGCACACCTACTTCCAGCTTCCCATGTAAGCTATACCGATGGCGAATCGATCTACCAATACATCAACTCCACCAAAACTCCTATGGCTTACATGACTCACGTAAGGACGGAGCTCGGAGTCAAACCAGCACCGTTTATGGCTGCATTCTCCTCGAGAGGTCCCAATACAATCGAGGAGTCAATACTCAAGCCTGATATAACTGCACCGGGTGTCAATATAATGGCTGCCTACTCTGAAGATACCTCACCAAGTGGTTCACCATTTGATAACCGTCGAATTCCATTCAATATAATATCTGGTACTTCCATGTCATGCCCCCACATTTCTGGTATTGTTGGCCTTCTCAAAACCCTTTATCCACAATGGAGTCCAGCAGCTATCAAATCTGCAATCATGACCACAGCTGAAACAAGAGCCAATGACTTACATCCAATACTAGATACAACCAAGGTTAAAGCCAACCCATTTGCATACGGCGCAGGACACGTCCGTCCCAACCGAGCGGTGAACCCTGGTCTTGTTTACGACCTCACCACCAAGGACTACTTGAATTTCCTATGTGCTCGAGGCTACAACGAAACAAAAATCACCAAATTCTCAAATACATCATTCGTATGTTCGAAGTCATTCAAACTAACAGATTTCAACTACCCATCCATCTCCATTCCCAATCTAAAATCAGGCCCAGTGACAATCAAAAGAACTGTTAAGAATGTGGGAAGCCCAAGCACATATGTCGCTCGAGTCAAGGTACCCCCAGGAGTTTCGGTTTCGGTTAAGCCGAGTACATTGGAGTTTACTGGAATTGATGAAGAAAAGACTTTCCAAGTTGAACTGCAAAGTGTGGCAAACAGCAAGAATCAAGGATATGTGTTTGGGTCATTGGCTTGGTCTGATGGGAAGCATTATGTGAGAAGTCCAATTGTAGTGAATTTGGGATGA 2271 44.91 MSFQLKTFILLHLVQSYIVYLGSHSHGLHPSPASLRIASESHYSLLGSMLGSNEEAKEAIFYSYNRHINGFAAILDQNVAEDLAKHPGVVSVNENKGRKLHTTSSWRFLGVENDDGIPANSIWNLASFGESTIIANLDTGVWPESKSFSDEGYGPIPTKWKGSCEGGSKFHCNRKLIGARYFNKGYEAIVGSLNASYETARDDDGHGTHTLSTAGGNFISGANVFGNGNGTAKGGSPKARVVAYKVCWPQQSSGGGCFDADILAAIEAAISDGVDVLSLSLGGNSKEFLDDVTAIGAFHAFQNGIVVVCSAGNSGPALGTVENVAPWLVTVAASTINREFTNYLALGNQKHVKGASLSDKILPTQKFYPLINAADAKANNVSADDARLCQDGMLDPEEVKGKIIVCLRGENGRVDKGYAAAQAGAVGMILANTEQNGDELMADAHLLPASHVSYTDGESIYQYINSTKTPMAYMTHVRTELGVKPAPFMAAFSSRGPNTIEESILKPDITAPGVNIMAAYSEDTSPSGSPFDNRRIPFNIISGTSMSCPHISGIVGLLKTLYPQWSPAAIKSAIMTTAETRANDLHPILDTTKVKANPFAYGAGHVRPNRAVNPGLVYDLTTKDYLNFLCARGYNETKITKFSNTSFVCSKSFKLTDFNYPSISIPNLKSGPVTIKRTVKNVGSPSTYVARVKVPPGVSVSVKPSTLEFTGIDEEKTFQVELQSVANSKNQGYVFGSLAWSDGKHYVRSPIVVNLG 756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8505527 8508972 + Sed0018375.1 Sed03g1335 706822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g1335 756 FunFam Subtilisin-like protease SBT1.5 131 354 - -
Sed03g1335 756 Pfam Subtilase family 129 604 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed03g1335 756 Pfam Peptidase inhibitor I9 16 101 IPR010259 -
Sed03g1335 756 Gene3D - 337 481 - -
Sed03g1335 756 CDD PA_subtilisin_like 346 472 - -
Sed03g1335 756 SUPERFAMILY PA domain 394 470 IPR046450 -
Sed03g1335 756 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Sed03g1335 756 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Sed03g1335 756 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Sed03g1335 756 FunFam subtilisin-like protease SBT1.5 337 481 - -
Sed03g1335 756 SUPERFAMILY Subtilisin-like 102 616 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed03g1335 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 12 101 IPR037045 -
Sed03g1335 756 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 752 IPR045051 -
Sed03g1335 756 Pfam Fibronectin type-III domain 657 753 IPR041469 -
Sed03g1335 756 Pfam PA domain 384 460 IPR003137 -
Sed03g1335 756 Gene3D - 629 755 - -
Sed03g1335 756 FunFam Subtilisin-like protease SBT5.3 10 101 - -
Sed03g1335 756 Gene3D Peptidase S8/S53 domain 132 625 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed03g1335 756 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Sed03g1335 756 FunFam Subtilisin-like protease SBT1.5 629 756 - -
Sed03g1335 756 CDD Peptidases_S8_3 99 578 IPR034197 -
Sed03g1335 756 ProSiteProfiles Serine proteases, subtilase domain profile. 105 612 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g1335 Sed-Chr3:8505527 Sed08g2878 Sed-Chr8:39924691 0.00E+00 dispersed
Sed03g1334 Sed-Chr3:8497376 Sed03g1335 Sed-Chr3:8505527 1.60E-283 tandem
Sed03g1335 Sed-Chr3:8505527 Sed03g1336 Sed-Chr3:8510690 4.20E-60 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g1335 - - - 0.0