Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g1337 ATGTTTAAACATTTATATACTTTGTTTGATTCGGTTTTTCTTTATGTGATTTTGTTTGACATTTACTCTATTTTTACCATCTGTTTATTTGTTTATTTTGTTTGCAAGTACAGTAATGAAGCTGCTAAGGAAGCCATTTTCTACTCATACAATAGATATATCAATGGCTTTGCTGCTGTGCTTGATCAGAAAGTTGCAGAAGATCTAGGAAAACATCCGGACGTGGTAGCGATACACGAAAACAAGGCAAGAAAACTGCACACGACAAGTTCATGGAGATTTCTTGGATTGGAGAATGATGGTGGGATAATCCCTTCAAACTCTCTTTGGAATGTTGCAAGTTTTGGTGAATCTACAATCATTGCCAACCTTGACACAGGTGTTTGGCCAGAATCAAAGAGCTTCAATGATGAAGGGTATGGACCAATCCCAACAAGGTGGAAGGGAAATTGTGAAGGTGGCTCCAACTTTCATTGCAACAGGAAGCTGATAGGAGCAAGGTACTTCAATAAAGGCTATGCAGCCTTCGCAGGACCTCTCAATGCAAGCTTTGAATCAGCAAGGGACAATGAAGGCCATGGAACACACACATTATCCACAGCAGGAGGCAATTTTGTTTCAAGAGCAAGCATTTTTGGGAATGGAAATGGCACAGCAAAAGGTGGCTCTCCTAAAGCCCGTGTTGCTGCGTATAAAGTATGCTGGCCTCCAACACTTTCGGCTGGTGGATGTTACGACTCCGACATTTTTGCTGGCATTGAAGCCGCCATAAGTGATGGAGTTGATGTTCTCTCGTTATCACTCGGCGCGGGTCCCCAAGATTTCGTCGATGATGGAATTGCCATTGCCACCTTCCATGCAGTTCAACATGGGATCACTGTTGTTTGTTCAGCGGGAAACTCAGGACCAACTCCTGGTTCAGTGTCAAATGTTGCACCATGGGTTATAACTGTGGGAGCTAGCACAATTGACAGGCTCTTTACCAGTTATGTTGCCCTCGGAAACAAGAAGCATATCAAGGGTGCAAGTCTTTCTGATAAAATATTGCCAGTTCAGAAGTTCTATCCATTGATCAATTCTTTAGATGCAAAAGCCAACAATAGTGTCTATGACATCGACGCACAACTGTGTTTAGAAGGGTCACTTGATCCCAAAAAGGTAAAAGGGAAGATTGTAGTTTGCCTCAGAGGGGAAAATTCAAGAGTGGACAAGGGTTATATTATTGCTCAAGCAGGTGCTGTTGGGATGATTCTTGCTAATGACAAGCAAAATGGAGATGAGATTTTAGCTGATGCACACTTCCTTCCTACTTCCCATGTAACTTATACTGATGGTGAATTGGTCTACCAATACATCAACTCTACCAAAATTCCAATGGCTTTCATGACTCATGTAAAGACAGAGTTAGGAGTGAAACCAGCACCATTCATGGCTGCATTCTCTTCAAGAGGTCCTAACTTAGTTGATGCCTCAATACTCAAGCCTGATATAACAGCACCGGGTGTCAACATTATAGCGTCTTACACCGAAGACAGATCACCAACTGGTTCGAAATTCGACAAGCGTCGGATTCCATTCAATGTAGAATCTGGGACTTCCATGTCATGCCCCCATGTTGCTGGTATCGTTGGCCTTCTTAAAACCCTTTATCCAAAGTGGAGTCATGCAGCTATCAGATCTGCCATCATGACCACAGCTGAAACAAATGCTAATGACTTACACCCAATACTAAGCACAAGCAAGGTGAAAGCAGATCCATTCGAGTACGGAGCAGGCCATGTGAATCCAAACCAAGCAGCAGACCCCGGCCTAGTTTACGACCTGAGCGTCAAGGACTACTTAAACTTCTTGTGCGCTCGAGGCTACAACGACACACAAATGAAACAATTCTCTGACACAACCTTTGTCTGTTCCAAGTCCTTCAAAGTATCAGATTTGAACTACCCATCAATCTCCATCCCTGACCTGAAATCAGGAGCAGTTGTGAAAGTGAACAGAAGGGTGAAGAACGTGGGAAGCCAAGGCACTTACGTTTCTGAAATCGAGGCGCCGCTCGGAGTTTCAGTCACAGTCGAGCCAAGTTCGTTGCAGTTTACTACTGTTGGTGAAGAGAAGAGTTTCAGTGTTGTGTTCAAGAGGGTGAGAAATGATGATCATCCAGGGTATGTGTTTGGGAAACTTGCTTGGTCTGATGGGAAGCATAGAGTAAGAAGTCCAATTGTTGTGCAATTGGGATGA 2238 43.52 MFKHLYTLFDSVFLYVILFDIYSIFTICLFVYFVCKYSNEAAKEAIFYSYNRYINGFAAVLDQKVAEDLGKHPDVVAIHENKARKLHTTSSWRFLGLENDGGIIPSNSLWNVASFGESTIIANLDTGVWPESKSFNDEGYGPIPTRWKGNCEGGSNFHCNRKLIGARYFNKGYAAFAGPLNASFESARDNEGHGTHTLSTAGGNFVSRASIFGNGNGTAKGGSPKARVAAYKVCWPPTLSAGGCYDSDIFAGIEAAISDGVDVLSLSLGAGPQDFVDDGIAIATFHAVQHGITVVCSAGNSGPTPGSVSNVAPWVITVGASTIDRLFTSYVALGNKKHIKGASLSDKILPVQKFYPLINSLDAKANNSVYDIDAQLCLEGSLDPKKVKGKIVVCLRGENSRVDKGYIIAQAGAVGMILANDKQNGDEILADAHFLPTSHVTYTDGELVYQYINSTKIPMAFMTHVKTELGVKPAPFMAAFSSRGPNLVDASILKPDITAPGVNIIASYTEDRSPTGSKFDKRRIPFNVESGTSMSCPHVAGIVGLLKTLYPKWSHAAIRSAIMTTAETNANDLHPILSTSKVKADPFEYGAGHVNPNQAADPGLVYDLSVKDYLNFLCARGYNDTQMKQFSDTTFVCSKSFKVSDLNYPSISIPDLKSGAVVKVNRRVKNVGSQGTYVSEIEAPLGVSVTVEPSSLQFTTVGEEKSFSVVFKRVRNDDHPGYVFGKLAWSDGKHRVRSPIVVQLG 745
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8513307 8518297 - Sed0013540.1 Sed03g1337 706824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g1337 745 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 43 741 IPR045051 -
Sed03g1337 745 FunFam Subtilisin-like protease SBT1.5 118 338 - -
Sed03g1337 745 Pfam Fibronectin type-III domain 645 742 IPR041469 -
Sed03g1337 745 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 87 IPR037045 -
Sed03g1337 745 FunFam Subtilisin-like protease SBT1.5 617 745 - -
Sed03g1337 745 Gene3D - 324 469 - -
Sed03g1337 745 Pfam PA domain 373 446 IPR003137 -
Sed03g1337 745 Pfam Subtilase family 116 592 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed03g1337 745 SUPERFAMILY Subtilisin-like 87 604 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed03g1337 745 Gene3D Peptidase S8/S53 domain 119 613 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed03g1337 745 CDD PA_subtilisin_like 330 461 - -
Sed03g1337 745 SUPERFAMILY PA domain 382 457 IPR046450 -
Sed03g1337 745 PRINTS Subtilisin serine protease family (S8) signature 116 135 IPR015500 -
Sed03g1337 745 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Sed03g1337 745 PRINTS Subtilisin serine protease family (S8) signature 189 202 IPR015500 -
Sed03g1337 745 FunFam subtilisin-like protease SBT1.5 324 469 - -
Sed03g1337 745 ProSiteProfiles Serine proteases, subtilase domain profile. 91 600 - -
Sed03g1337 745 CDD Peptidases_S8_3 85 566 IPR034197 -
Sed03g1337 745 Gene3D - 617 744 - -
Sed03g1337 745 Pfam Peptidase inhibitor I9 39 87 IPR010259 -
Sed03g1337 745 ProSitePatterns Serine proteases, subtilase family, serine active site. 531 541 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g1337 Sed-Chr3:8513307 Sed08g2878 Sed-Chr8:39924691 0.00E+00 dispersed
Sed03g1336 Sed-Chr3:8510690 Sed03g1337 Sed-Chr3:8513307 2.90E-61 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g1337 - - - 0.0