Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed03g1384 | ATGGCGCCTTGTTTTGACCTTGCGGTTTCGAATCTTTTATGTGCTGACGAGAATTGTGATTTCGATGATAACGATGATGAGGAGTTTGTGGTCGGTCCCTGTTTTGTTACAAGTTGTGGGGTACAGAGCCGTCGCGGCGGCGGCGGAGACGGCGGCGATGGGTTGCCGTTTATCGGCGATGAGTGTTTGATTGAAATGGCTGAGAAGGAAACCCATCACTTACCTCTTGATGGGTATTTCTGTAAATTGCAGAACGGCGAGTTGGATGTTGGGGCTAGGAAAGAGGCTGTAAGTTGGATTCTAAAGGTGAGTGCTCATTTCAGCTTTGGACCTCTCTGTACATACTTAGCCGTAAATTACTTGGATCGTTTCCTCTCCTCTTTCGATTTGCCCAAAAGCAAAGCTTGGACAATGCAGTTACTGGCTGTGGCATGTCTGTCTCTTGCAGCCAAAATGGAGGAGACTGAAGTCCCACTCTTTTTGGATTTACAGGTGGGTGGATCAAAATTTGTGTTTGAAGCAAGAACTATAGAAAGAATGGAGCTTTTAGTCTTAACCACATTAGGGTGGAGAATGCAGGCAGTTACCCCTTTCTCGTTTATCGATCATTGTCTCCGCAGGATCCTTGATCACGAACTCTCTGTTGAAATGTCGGTCACCCGATCGATTTGCATACTTTTGAGCCTCATACAAGGTCCTCTTTCTATCCTTCCACTAGCTAGCATCAGTGTAGTATCAACATCCATTATATGTGTGACACGAACAATATGGTCATGTCGAGGTCTCGAAATGGTTTTGATTTATCTTCTTTTTCGGGTGGTCGGAAAACATATGCAGGGATCGATTTCTTGGAATTCAAACCTTTTGAAATTGCAGTAG | 879 | 44.82 | MAPCFDLAVSNLLCADENCDFDDNDDEEFVVGPCFVTSCGVQSRRGGGGDGGDGLPFIGDECLIEMAEKETHHLPLDGYFCKLQNGELDVGARKEAVSWILKVSAHFSFGPLCTYLAVNYLDRFLSSFDLPKSKAWTMQLLAVACLSLAAKMEETEVPLFLDLQVGGSKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHCLRRILDHELSVEMSVTRSICILLSLIQGPLSILPLASISVVSTSIICVTRTIWSCRGLEMVLIYLLFRVVGKHMQGSISWNSNLLKLQ | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 8792868 | 8794994 | - | Sed0015029.2 | Sed03g1384 | 706871 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed03g1384 | 292 | Pfam | Cyclin, N-terminal domain | 65 | 192 | IPR006671 | - | |
Sed03g1384 | 292 | CDD | CYCLIN_AtCycD-like_rpt1 | 92 | 190 | - | - | |
Sed03g1384 | 292 | Gene3D | - | 65 | 251 | - | - | |
Sed03g1384 | 292 | SUPERFAMILY | Cyclin-like | 58 | 192 | IPR036915 | - | |
Sed03g1384 | 292 | Gene3D | - | 76 | 193 | - | - | |
Sed03g1384 | 292 | FunFam | D2/4-type cyclin | 76 | 193 | - | - | |
Sed03g1384 | 292 | SMART | cyclin_7 | 98 | 186 | IPR013763 | - | |
Sed03g1384 | 292 | PANTHER | CYCLINS | 67 | 262 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g1384 | Sed-Chr3:8792868 | Sed04g0187 | Sed-Chr4:1317654 | 3.20E-99 | dispersed | |
Sed03g1383 | Sed-Chr3:8792868 | Sed03g1384 | Sed-Chr3:8792868 | 4.80E-134 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed03g1384 | K18810 | - | csv:101216206 | 330.872 |