Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g1432 ATGGCCGCCACCGTGCCGGACAACCTCCCTCGCGAGCAATACGTGTACCTAGCGAAGCTTGCGGAGCAGGCTGAAAGATATGAGGAAATGGTTCAGTTCATGCAGAAGCTCGTTCTTGGTTCAACCCCAGGCTCCGAGCTCTCCGTCGAGGAGCGAAATCTTCTCTCTGTGGCCTACAAGAACGTGATTGGATCACTTCGAGCCGCTTGGAGGATTGTCTCTTCGATCGAGCAGAAGGAGGAGAGCCGTAAGAATGAAGAGCATGTTGTTCTTGTTAAGGAGTATAGATCCAAGGTTGAGTCTGAGCTTTCTCAGGTCTGTGCGAGTATTTTGAAGCTTTTGGACTCGAATCTTATTCCGTCGGCCTCTGCTAGTGAATCTAAGGTCTTCTACTTGAAGATGAAGGGGGATTACCATAGGTATTTGGCGGAGTTTGAGGTTGGGGATGTGAGGAAAGCTGCTGCTGAGGATACTATGCTGGCTTATAGAGCTGCTCAGGACGTCGCAGGTGCGGATCTCGCCCCCACTCATCCGATAAGGCTGGGGCTTGCTCTCAATTTCTCTGTGTTTTACTTCGAGATTCTGAATCAGTCCGATAAAGCATGTACCATGGCCAAGGAGGCATTTGAGGAAGCCATTGCTGAGCTGGACACTTTGGGTGAAGAATCATACAAGGATAGTACCCTCATCATGCAGCTGTTGAGAGACAACCTCACTCTCTGGACTTCAGATGCGCAGGATGCGTTAGATGAGTCGTAG 759 50.2 MAATVPDNLPREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPGSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKEYRSKVESELSQVCASILKLLDSNLIPSASASESKVFYLKMKGDYHRYLAEFEVGDVRKAAAEDTMLAYRAAQDVAGADLAPTHPIRLGLALNFSVFYFEILNQSDKACTMAKEAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDALDES 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9082286 9087350 + Sed0023299.1 Sed03g1432 706919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g1432 252 PIRSF 14-3-3 7 252 IPR000308 -
Sed03g1432 252 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Sed03g1432 252 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Sed03g1432 252 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Sed03g1432 252 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Sed03g1432 252 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Sed03g1432 252 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Sed03g1432 252 PANTHER 14-3-3 PROTEIN 11 246 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Sed03g1432 252 Pfam 14-3-3 protein 17 242 IPR023410 -
Sed03g1432 252 SMART 1433_4 11 251 IPR023410 -
Sed03g1432 252 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Sed03g1432 252 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Sed03g1432 252 FunFam 14-3-3 protein epsilon 8 252 - -
Sed03g1432 252 SUPERFAMILY 14-3-3 protein 10 244 IPR036815 -
Sed03g1432 252 Coils Coil 17 37 - -
Sed03g1432 252 Gene3D - 2 251 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g1432 Sed-Chr3:9082286 Sed13g2141 Sed-Chr13:26046387 1.20E-99 dispersed
Sed03g1432 Sed-Chr3:9082286 Sed04g0227 Sed-Chr4:1648824 3.30E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g1432 K06630 - csv:101222827 464.151