Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed03g1432 | ATGGCCGCCACCGTGCCGGACAACCTCCCTCGCGAGCAATACGTGTACCTAGCGAAGCTTGCGGAGCAGGCTGAAAGATATGAGGAAATGGTTCAGTTCATGCAGAAGCTCGTTCTTGGTTCAACCCCAGGCTCCGAGCTCTCCGTCGAGGAGCGAAATCTTCTCTCTGTGGCCTACAAGAACGTGATTGGATCACTTCGAGCCGCTTGGAGGATTGTCTCTTCGATCGAGCAGAAGGAGGAGAGCCGTAAGAATGAAGAGCATGTTGTTCTTGTTAAGGAGTATAGATCCAAGGTTGAGTCTGAGCTTTCTCAGGTCTGTGCGAGTATTTTGAAGCTTTTGGACTCGAATCTTATTCCGTCGGCCTCTGCTAGTGAATCTAAGGTCTTCTACTTGAAGATGAAGGGGGATTACCATAGGTATTTGGCGGAGTTTGAGGTTGGGGATGTGAGGAAAGCTGCTGCTGAGGATACTATGCTGGCTTATAGAGCTGCTCAGGACGTCGCAGGTGCGGATCTCGCCCCCACTCATCCGATAAGGCTGGGGCTTGCTCTCAATTTCTCTGTGTTTTACTTCGAGATTCTGAATCAGTCCGATAAAGCATGTACCATGGCCAAGGAGGCATTTGAGGAAGCCATTGCTGAGCTGGACACTTTGGGTGAAGAATCATACAAGGATAGTACCCTCATCATGCAGCTGTTGAGAGACAACCTCACTCTCTGGACTTCAGATGCGCAGGATGCGTTAGATGAGTCGTAG | 759 | 50.2 | MAATVPDNLPREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPGSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKEYRSKVESELSQVCASILKLLDSNLIPSASASESKVFYLKMKGDYHRYLAEFEVGDVRKAAAEDTMLAYRAAQDVAGADLAPTHPIRLGLALNFSVFYFEILNQSDKACTMAKEAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDALDES | 252 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 9082286 | 9087350 | + | Sed0023299.1 | Sed03g1432 | 706919 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed03g1432 | 252 | PIRSF | 14-3-3 | 7 | 252 | IPR000308 | - | |
Sed03g1432 | 252 | PRINTS | 14-3-3 protein zeta signature | 161 | 187 | IPR000308 | - | |
Sed03g1432 | 252 | PRINTS | 14-3-3 protein zeta signature | 95 | 119 | IPR000308 | - | |
Sed03g1432 | 252 | PRINTS | 14-3-3 protein zeta signature | 188 | 214 | IPR000308 | - | |
Sed03g1432 | 252 | PRINTS | 14-3-3 protein zeta signature | 46 | 75 | IPR000308 | - | |
Sed03g1432 | 252 | PRINTS | 14-3-3 protein zeta signature | 126 | 148 | IPR000308 | - | |
Sed03g1432 | 252 | PRINTS | 14-3-3 protein zeta signature | 215 | 244 | IPR000308 | - | |
Sed03g1432 | 252 | PANTHER | 14-3-3 PROTEIN | 11 | 246 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
Sed03g1432 | 252 | Pfam | 14-3-3 protein | 17 | 242 | IPR023410 | - | |
Sed03g1432 | 252 | SMART | 1433_4 | 11 | 251 | IPR023410 | - | |
Sed03g1432 | 252 | ProSitePatterns | 14-3-3 proteins signature 1. | 52 | 62 | IPR023409 | - | |
Sed03g1432 | 252 | ProSitePatterns | 14-3-3 proteins signature 2. | 224 | 243 | IPR023409 | - | |
Sed03g1432 | 252 | FunFam | 14-3-3 protein epsilon | 8 | 252 | - | - | |
Sed03g1432 | 252 | SUPERFAMILY | 14-3-3 protein | 10 | 244 | IPR036815 | - | |
Sed03g1432 | 252 | Coils | Coil | 17 | 37 | - | - | |
Sed03g1432 | 252 | Gene3D | - | 2 | 251 | IPR036815 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g1432 | Sed-Chr3:9082286 | Sed13g2141 | Sed-Chr13:26046387 | 1.20E-99 | dispersed | |
Sed03g1432 | Sed-Chr3:9082286 | Sed04g0227 | Sed-Chr4:1648824 | 3.30E-129 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed03g1432 | K06630 | - | csv:101222827 | 464.151 |