Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed03g1590 | ATGGGGGCTGCGTTTGAGGGAGTAGCAAAAGATTTCAAAGGGAGAGCAGCCTGCTATAAACAGGATTGGATATGTGGACTAGGTTCAGGCGCCAGGATTTTAGCTCCTACTATGTACATCTTCTTCGCCTCTGCTCTTCCTGTTATCGCCTTCGGAGAGCAACTTAGTAGGGATACAGGTGAAAATTTGAGCACAGTGGAAACATTAGCCTCAACGGCGATTTGTGGAATTATCCATTCAATATTTGGAGGACAGCCATTGCTGATTGTAGGAGTGGCAGAACCAACAGTTATAATGTACACTTACTTGTACGGTTTCTGCAAAAGCCGACCCGATTTAGGCGGCAAGCTCTTTATAGCCTGGGCTGGATGGGTGTGCATTTGGACAGGCTTCTTCTTGATTCTCCTTGCAATCTTTAATGCTTGCACCATTATCATCAAGTTTACTAGAGTTGCTGGTGAATTGTTTGGCATGCTTATTTCTGTTCTTTTCTTCCAAGAGGCAATTAAGGGAATTAGAAGCGAGTTCAAGATGCCAAAGTCAGAAGATCCAAACCTATTGGAGTACCAATTTGAATGGTTGTTTGCAAATGGATTGCTTGCCATCATTTTCGCCAGCGGTGTTCTCTTTACGTCGCTGAAAACTCGACGTGCAAGATTGTGGAAATATGGCACAGGCTGGTTTCGGAGTTTAATCGCAGAATACGGTGTTCCGCTTATGGTCGTGTTATGGACAGCATTGTCTTATGGAGTTCCCAGCAAAGTCCCAGAGGGAGTTCCAAGGAGGCTCTTTTGTCCATTACCTTGGGAGCCAGCCTCATTGTACCACTGGACTGTCATCAAGGACATGGGGAAGATTCCATTTATTTACATCTTAGCTGCTTGTCTGCCAGCCATGATGATAGCAGGCTTATACTTCTTTGACCATAGTGTTGCATCACAAATGGCTCAACAGAAAGAGTACAATCTTCAAAACCCCTCTTCATATCATTATGATATCTTCTTGCTAGGGATTATGACTTTGATTTGTGGATTGCTTGGACTACCTCCTTCTAATGGTGTCCTCCCACAGTCTCCTATGCACACGAAGAGTCTCTCCATGCTTAATCGGCAGCAAATTCGTCGAAAAATGATACGAAATGCAAAGGAATGTATCAAACTAAAAGCATCCAACTCTGAAATTTATGGAAGGATGCAGGCTGCATTCATTGAAATGGATGCATCTCCATCTCCTAAAGAGCTAGAAACCTTGGCGAAGGCGGTAAAGAGCGTGGAGGACAGTGATCGGAAGGTAAAATTTGACGCAGAGAAGACTATAGATCCATATTTGCCTGTCCGTGTGAATGAACAAAGATTGAGCAACTTGCTGCAGTCCCTCCTTGTGGGGTTATCAATATTTTTTATCCCTTTAATGAAAAGGATACCTACTTCAGTTCTTTGGGGTTACTTTGCTTACATGGCTATTGATAGTCTCCCAGGAAATCAGTTCTGGGAAAGATTGTTGCTGCTCCTCATTACGCCCGGACGGCGTTTCAAGGTGTTGGAGGGTTCTCATTTATCTTTCGTCGAATCGGTGCCATTCAAGGTCATTGTGTCGTTTACGCTCTTTCAGTTTGCGTATTTCTTGTTGTGCTTTGGGATAACATGGATACCTGTAGCTGGGATTTTGTTCCCTCTGCCATTTTTCCTTCTCATTAGCATAAGAGAACATGTGCTCCCAAGGTTCTTCCAGCCTCACCATCTTCAAGAGCTAGATGCTGCAGAGTATGAGGAGATTCCAGCCGGCGCTCGACATCGAAATCGCAGTACAGTTTCGCGTACTCTCTCGAATTCTCCATTGCTTCGTTTCGCTGAAAATGAGACAACGGATTCAAACGCGGACGAGAATATCATAGAATACTACGACTCGGAGGTATTAGATGAGATGACAACTCATAGAGGAGAAATATTGAAGTTCAGGAATAATAGGAAAGACATTATTTTTTCTTCTCATACAGTGGCGCTGCTAACTTAA | 2013 | 43.72 | MGAAFEGVAKDFKGRAACYKQDWICGLGSGARILAPTMYIFFASALPVIAFGEQLSRDTGENLSTVETLASTAICGIIHSIFGGQPLLIVGVAEPTVIMYTYLYGFCKSRPDLGGKLFIAWAGWVCIWTGFFLILLAIFNACTIIIKFTRVAGELFGMLISVLFFQEAIKGIRSEFKMPKSEDPNLLEYQFEWLFANGLLAIIFASGVLFTSLKTRRARLWKYGTGWFRSLIAEYGVPLMVVLWTALSYGVPSKVPEGVPRRLFCPLPWEPASLYHWTVIKDMGKIPFIYILAACLPAMMIAGLYFFDHSVASQMAQQKEYNLQNPSSYHYDIFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLSMLNRQQIRRKMIRNAKECIKLKASNSEIYGRMQAAFIEMDASPSPKELETLAKAVKSVEDSDRKVKFDAEKTIDPYLPVRVNEQRLSNLLQSLLVGLSIFFIPLMKRIPTSVLWGYFAYMAIDSLPGNQFWERLLLLLITPGRRFKVLEGSHLSFVESVPFKVIVSFTLFQFAYFLLCFGITWIPVAGILFPLPFFLLISIREHVLPRFFQPHHLQELDAAEYEEIPAGARHRNRSTVSRTLSNSPLLRFAENETTDSNADENIIEYYDSEVLDEMTTHRGEILKFRNNRKDIIFSSHTVALLT | 670 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 10096502 | 10100966 | + | Sed0013509.1 | Sed03g1590 | 707077 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed03g1590 | 670 | PANTHER | ANION EXCHANGE PROTEIN | 4 | 641 | IPR003020 | GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER) | |
Sed03g1590 | 670 | Pfam | HCO3- transporter integral membrane domain | 199 | 372 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Sed03g1590 | 670 | Pfam | HCO3- transporter integral membrane domain | 4 | 178 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Sed03g1590 | 670 | Pfam | HCO3- transporter integral membrane domain | 445 | 587 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Sed03g1590 | 670 | Gene3D | Helical hairpin bin | 15 | 57 | - | - | |
Sed03g1590 | 670 | FunFam | probable boron transporter 2 | 15 | 57 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g1590 | Sed-Chr3:10096502 | Sed05g1467 | Sed-Chr5:28389525 | 4.50E-258 | dispersed | |
Sed03g1589 | Sed-Chr3:10096033 | Sed03g1590 | Sed-Chr3:10096502 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed03g1590 | K24194 | - | csv:101220188 | 1034.25 |