Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g1863 ATGGCGTTCTCTCAATCCCTACAACTCATTCAATTTCCCCCTCACGCACTATCCTCACCCTCTCCCAATCCTTTCATCTCCGCATCTCCATGGATTTCCTCTTTGGCTCCGTCGCGGAGCTGCCGGATGAGATTATCATCTTCCAGAATCAAGTGTTTCTCCACGTCCACCGACGAGGAGCAGTGGAGTGAATCGGAAGATTTGGTGTCCGATGAAGGCGGAGATCGTGAGGATGATGACATTGGTGTTCCGCAAGACATTTCTGTGGCCACCGCTGCTGCTTCTGCGCAGAGGATCTCTTCCTCGTCTCGGGATTATATGTCGCTTGCGATTCGAGAGCCGGTGTATGAGGTGTTAGAGGTTAAAGCAGACGGCGCTGTATCCACTAGGAAGATTAACAGACGCCAGCTGTTGAAGTCAAGTGGGCTTCGTCCACGTGATGTCCGAAGTGTTGATCCATCTTTATTTTTGACAAATTCAATGCCTTCATTACTGGTTCGTGAACATGCTCTTTTGCTTAATCTGGGTTCGCTTCGAGCAATAGCTATGCAGGATTGTGTCCTCATATTCGATTATAACCGTCCAGGAGGACAAGCTTTTATCGAATCATTGTTGCCACGATTAAACCCAAAAAGCATGAATGGAGTGCCAGAAATGCCATTTGAACTTGAGGTTGTTGAAGCTGCATTGCTTTCACGAACACAACGTTTAGAGCAGCGGCTAATGAAAGTAGAACCTCGTGTTCAAGCTCTACTTGAAGTAGTGCCCAACAAATTAACTGCTGGTGTGTTGGAGCAACTTCGTATTAGCAAGCAGACTTTGGTTGAATTAGGGTCCAGGGCAGGGGCTCTTAGACAAATGCTTCTTGATCTTTTGGAGGATCCAGAAGAAATACGACGTATCTGTATTATGGGAAGAACTTGCACGCTTAATAAGATAACTGATGATGTGGAGTGCTCTCTTCCTTTGGATAAGCAGATTGTTGATGAAGAGGAAGAAGAAATAGAAATGCTGTTGGAAAATTATCTCCAGAGATGCGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTGGATTCTGCAAAAGAAATGGAAGATTCAATTGCCGTCAATTTGAGCTCGCGACGACTGGAGGTTAGCCGGGTGGAATTGCTTCTTCAAGTTGGGACATTTTGTGTGGCTGTTGGTGCTTTGGTTGCAGGAATATTTGGCATGAACTTAAGATCATACCTTGAAGAACACGTGCTTGCCTTCTGGTTAACAACATCTGGGATAATTGTTGGTGGTGTTGTGGCATTCTTTCTCATGTATTCGTATCTCAGAGATAGAAGAATCCTATAG 1338 45.37 MAFSQSLQLIQFPPHALSSPSPNPFISASPWISSLAPSRSCRMRLSSSRIKCFSTSTDEEQWSESEDLVSDEGGDREDDDIGVPQDISVATAAASAQRISSSSRDYMSLAIREPVYEVLEVKADGAVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPSLLVREHALLLNLGSLRAIAMQDCVLIFDYNRPGGQAFIESLLPRLNPKSMNGVPEMPFELEVVEAALLSRTQRLEQRLMKVEPRVQALLEVVPNKLTAGVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPEEIRRICIMGRTCTLNKITDDVECSLPLDKQIVDEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVLAFWLTTSGIIVGGVVAFFLMYSYLRDRRIL 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12482713 12498597 - Sed0014392.1 Sed03g1863 707350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g1863 445 CDD Mrs2_Mfm1p-like 118 444 IPR039204 -
Sed03g1863 445 MobiDBLite consensus disorder prediction 56 80 - -
Sed03g1863 445 FunFam Magnesium transporter MRS2-11, chloroplastic 194 376 - -
Sed03g1863 445 Gene3D Magnesium transport protein CorA, transmembrane region 195 376 - -
Sed03g1863 445 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 97 444 IPR039204 GO:0009941(PANTHER)|GO:0015095(PANTHER)|GO:0015693(PANTHER)
Sed03g1863 445 Gene3D - 108 192 - -
Sed03g1863 445 FunFam Magnesium transporter MRS2-11, chloroplastic 111 192 - -
Sed03g1863 445 Pfam Magnesium transporter MRS2-like 123 375 - -
Sed03g1863 445 MobiDBLite consensus disorder prediction 60 79 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g1863 K16075 - csv:101219314 670.233