Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g2040 ATGAGATTCACAAGATCCAGCTTCAGCATCAGAACTGGGCGGAAACAGGCGATGAATTTCGCCGTACAAGTTCTTTCCGGCCGATGGTTCACCATCTTCGCTTCCTTACTCATCATGTCCGTTTCCGGCGCCGGCTACATGTTCGCACTCTACTCCGGCGACATCAAATCCTCCTTCAACTACGACCAAACCACTCTCAACCTCATCGGCTTCTTCAAGGATCTCGGTTCCAACGTCGGAATCATCTCCGGCCTCGTCAACGAAATCACGCCGCCGTCGGTCGTCCTCTTCATCGGCGGGGTAATGAATTTCTTTTCCTATTTCATGATTTGGCTCTTTGTCACTCACCGAATCCCCAAACCCAGTGTGCCCACAATGTGTTTGTTAATATGCCTGGGTGCCAATTCTCAGACTTATGCTAATACAGGGGCTTTGATTCCTTCTGTGAGGAATTTCCCTGAGAATAGAGGGAATGTGTTGGGTTTGTTGAAGGGGTTTGTGGGCTTGAGTGGGGCTATTTTGACTCAGATCTACCATGCTTTTTATGGGGATGATTCTGTGGATTTTATCTTGCTTATTGCTTGGCTGCCTTCTGCTGTTTCTTTCCTGTTTCTTTGGATTGTTAGAGTTGTGGAAGTCAATGGAATATCCAAATCTAATGATCTGAAGAATTTCTATTACATGCTCTATATTTCCCTTGGTCTTGCTGGGTTTCTCATGATTTTGATTATTGTTCAAAATGAGGTCATGTTTACTAGGATTCAGTATCTGGGCTGTGCTTTTATTCTCCTTGTGCTTCTTTTTCTTCCCCTTGTTGTTGTTATAAGAGAGGAACTCATTATTAGGAAGAGAAAATTGCAAGGTGTGGATGTAAGTTCTTGGCTTCAACCAGACCCATCTTTAGCTGAATTACCAAGTTCGCAGGTAGTCGATGCAAACCCGAGTTCTTGGTTTAAGAATGTGTTCAGGCCGCCGGAAAGAGGGGAGGATTACAGCATTTTACAAGCAATCTTCAGTATAGATATGTTTATTCTGTTTGTTGCTACTATTTGTGGGGCTGGTGGGACTTTGACTGCTATGGACAACTTGAGTCAGATAGGCAGCTCGCTTGGATACTCAAGTCATAGCATTTCCACTTTCACTTCCCTCGTGAGTATATGGGGCTTTCTCGGTCGAGCTTTTTCGGGTTATGCTTCTGAATTCTTGTGGACGAAGTATAACTTCTCTCGCCCTCTATTCCTCACGCTTGTGCTTATTTTATCTTGTGTTGGTCATCTTATAATTGCCTTCGGAGTTCCAGGTTCGCTTTACTTTGCTTCAGTGATCATTGGATTTTGCTTTGGAGCACAATGGCCATTGATTTTCGCCATTGTATCTGAATTATTTGGTTTGAAATACTATGCAACTTTGTATAGCATTAGTGGAATTGCTAGCCCAGTTGGCTCATACATTTTCAATGTGAAAGTGGCTGGCTATTTATATGACCAAGAGGCTAGAAAGCAAATGGAAGCCATTGGTCTTAGAAGTGTAGCAGGTAGAGACTTAGCCTGCAAGGGCGTCCAATGTTACAGATTAGCTTTTCTCATTATTACTGCTGCTACTGTGTTCGGTTGCGTGGTTTCGTTCATTTTGGTGCTTCGAACTTGGAAATTCTATAAGGGTGATATCTATAAAAGGTATAGAGAGGAAAGAAAGGAACAAGAATAA 1707 43.12 MRFTRSSFSIRTGRKQAMNFAVQVLSGRWFTIFASLLIMSVSGAGYMFALYSGDIKSSFNYDQTTLNLIGFFKDLGSNVGIISGLVNEITPPSVVLFIGGVMNFFSYFMIWLFVTHRIPKPSVPTMCLLICLGANSQTYANTGALIPSVRNFPENRGNVLGLLKGFVGLSGAILTQIYHAFYGDDSVDFILLIAWLPSAVSFLFLWIVRVVEVNGISKSNDLKNFYYMLYISLGLAGFLMILIIVQNEVMFTRIQYLGCAFILLVLLFLPLVVVIREELIIRKRKLQGVDVSSWLQPDPSLAELPSSQVVDANPSSWFKNVFRPPERGEDYSILQAIFSIDMFILFVATICGAGGTLTAMDNLSQIGSSLGYSSHSISTFTSLVSIWGFLGRAFSGYASEFLWTKYNFSRPLFLTLVLILSCVGHLIIAFGVPGSLYFASVIIGFCFGAQWPLIFAIVSELFGLKYYATLYSISGIASPVGSYIFNVKVAGYLYDQEARKQMEAIGLRSVAGRDLACKGVQCYRLAFLIITAATVFGCVVSFILVLRTWKFYKGDIYKRYREERKEQE 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14303667 14305879 + Sed0015356.1 Sed03g2040 707527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g2040 568 CDD MFS_Mch1p_like 27 538 - -
Sed03g2040 568 Gene3D MFS general substrate transporter like domains 335 551 IPR036259 -
Sed03g2040 568 Pfam Nodulin-like 28 275 IPR010658 -
Sed03g2040 568 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 27 561 - GO:0016020(PANTHER)
Sed03g2040 568 Pfam Major Facilitator Superfamily 346 546 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Sed03g2040 568 SUPERFAMILY MFS general substrate transporter 29 555 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2040 Sed-Chr3:14303667 Sed06g2020 Sed-Chr6:44310356 6.90E-183 dispersed
Sed02g0614 Sed-Chr2:43929007 Sed03g2040 Sed-Chr3:14303667 1.80E-196 wgd
Sed03g2040 Sed-Chr3:14303667 Sed04g1390 Sed-Chr4:28412251 7.50E-198 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g2040 - - - 0.0