Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed03g2083 | ATGGATTTCTTACAGTCTTTGGATCCTCAAATGCTTCTGGGTTTGGTTGTCGCTGTTTTAGCCCTCGTCGTTGCGGCTCTATATTTATTGCCCTCCTCCAAGAAAAGCAAATCTGGAGGTTGCTTGGATCCAGACAGTTTCAGGGAGTTTAAGCTTATCAAGCGTGTGCAGCTGAGCCATAATGTGGCCAAGTTTACATTTACCCTACCAAATCCTACTTCAGTCTTGGGTCTTCCCATTGGACAACATATAAGTTGCAGGGGCAAGGATGGCCAAGGTGAAGAGGTTATCAAACCTTACACACCTATTACTTTGGATTCTGATGTTGGCTATTTTGAACTGGTCATAAAGATGTATCCCCAAGGAAGGATGTCGCACCATTTCCGACAGATGCGTGTTGGTGATTTTCTTGCTGTAAAAGGGCCCAAGGGGCGTTTCAGGTATCAACCCGGCCAGGTTAGAGCATTTGGGATGCTTGCTGGAGGCTCTGGCATTACTCCTATGTATCAAGTTGCTCGAGCCATATTAGAAAATCCAAATGACAAGACGAAGGTACATCTCATTTATGCCAATGTCACCCATGATGACATTCTTTTAAAGGACGAGTTGGATCTTCTTGCCTCAAGGTTCCCAGATAGCTTCAAGATCTTTTATGTCTTAAACCAGCCTCCTGAAGTGTGGGACGGTGGTGTCGGGTTCGTATCAAAGGAGATGATTCAAACGCACTGCCCTGCTCCTGCTCCTGATGTTAAGATTTTAAGATGTGGGCCACCACCAATGAACAAGGCCATGGGTGCTCATCTTGAAGCTCTTGAATATACACCTGAGATGCTGTTCATGTTCTGA | 846 | 45.39 | MDFLQSLDPQMLLGLVVAVLALVVAALYLLPSSKKSKSGGCLDPDSFREFKLIKRVQLSHNVAKFTFTLPNPTSVLGLPIGQHISCRGKDGQGEEVIKPYTPITLDSDVGYFELVIKMYPQGRMSHHFRQMRVGDFLAVKGPKGRFRYQPGQVRAFGMLAGGSGITPMYQVARAILENPNDKTKVHLIYANVTHDDILLKDELDLLASRFPDSFKIFYVLNQPPEVWDGGVGFVSKEMIQTHCPAPAPDVKILRCGPPPMNKAMGAHLEALEYTPEMLFMF | 281 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 14969593 | 14977945 | - | Sed0025281.1 | Sed03g2083 | 707570 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed03g2083 | 281 | FunFam | NADH-cytochrome b5 reductase | 40 | 139 | - | - | |
Sed03g2083 | 281 | SUPERFAMILY | Ferredoxin reductase-like, C-terminal NADP-linked domain | 137 | 278 | IPR039261 | - | |
Sed03g2083 | 281 | SUPERFAMILY | Riboflavin synthase domain-like | 42 | 150 | IPR017938 | - | |
Sed03g2083 | 281 | PRINTS | Cytochrome B5 reductase signature | 157 | 176 | - | - | |
Sed03g2083 | 281 | PRINTS | Cytochrome B5 reductase signature | 134 | 148 | - | - | |
Sed03g2083 | 281 | PRINTS | Cytochrome B5 reductase signature | 76 | 87 | - | - | |
Sed03g2083 | 281 | PRINTS | Cytochrome B5 reductase signature | 98 | 105 | - | - | |
Sed03g2083 | 281 | PRINTS | Cytochrome B5 reductase signature | 195 | 206 | - | - | |
Sed03g2083 | 281 | PRINTS | Cytochrome B5 reductase signature | 251 | 259 | - | - | |
Sed03g2083 | 281 | Pfam | Oxidoreductase FAD-binding domain | 50 | 148 | IPR008333 | - | |
Sed03g2083 | 281 | Gene3D | - | 140 | 281 | IPR039261 | - | |
Sed03g2083 | 281 | PANTHER | NADH-CYTOCHROME B5 REDUCTASE | 23 | 281 | IPR001834 | GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER) | |
Sed03g2083 | 281 | FunFam | NADH-cytochrome b5 reductase | 139 | 281 | - | - | |
Sed03g2083 | 281 | Gene3D | Translation factors | 40 | 139 | - | - | |
Sed03g2083 | 281 | Pfam | Oxidoreductase NAD-binding domain | 158 | 263 | IPR001433 | GO:0016491(InterPro) | |
Sed03g2083 | 281 | ProSiteProfiles | Ferredoxin reductase-type FAD binding domain profile. | 45 | 149 | IPR017927 | GO:0016491(InterPro) | |
Sed03g2083 | 281 | CDD | cyt_b5_reduct_like | 50 | 281 | - | - | |
Sed03g2083 | 281 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 195 | 206 | IPR001709 | GO:0016491(InterPro) | |
Sed03g2083 | 281 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 157 | 176 | IPR001709 | GO:0016491(InterPro) | |
Sed03g2083 | 281 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 251 | 259 | IPR001709 | GO:0016491(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed02g0277 | Sed-Chr2:38384357 | Sed03g2083 | Sed-Chr3:14969593 | 2.20E-121 | dispersed | |
Sed03g2083 | Sed-Chr3:14969593 | Sed05g1022 | Sed-Chr5:8895169 | 2.00E-114 | dispersed | |
Sed03g2083 | Sed-Chr3:14969593 | Sed11g0102 | Sed-Chr11:949917 | 3.00E-54 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed03g2083 | K00326 | - | csv:101212569 | 491.886 |