Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g2128 ATGGGGAAAACCGACGGAGAACAGCCGCCGCCGTCCGCCGCCGCCTCCGGCGAGGTTCCCGGTGGCCGATGCTGTTCTGGGTGTGGTTCGATTCGGAGGCTCATTGGGTTCAGATGCATCTTCATTCTCTTATTGTCCGTTGCCCTGTTCGTTTCTGCTGTTTTTTGGTTGCCCCCTTTTCTCCATTATGCAGATCAGAAGGATCTGGGTCTAAATCCATCGTATCGAGGTCATGATATAGTAGCAACGTTTGATGTTGAGAGACCGGTTTCTTTGCTGGAAGACAATATCGAGCAACTCCGGGCTGACATTTTTGGAGAGTTCCTTATTCCTTCTATCAAAGTGGATATTCTATCTCTAGAATCATTATCAGGATCAAACCGGACAAAAGTTGTGTTTGGTGTCGATCCAGATGCTGATGATTCCGAGATTTCGTCACCTTTTCTAAGTTTAATCAGGTCGACCGTTGCAGATATAGTAGCGAATCAGTCGTCCCTCCGCATTACTAAATCCATGTTTGGGGATGCCTTTTTGTTTGAAGTGCTGAAATTCCCTGGAGGAATAACGATAATCCCGCCACAGAGTGCATTTCTTTTGCAGAAAGTGCAAATTCTTTTCAACTTTACATTGAACTTCTCTATTCATCAGATTCAAGTACATTTCAGTGAACTGACAAGCCAACTGGACGCCGGTTTACGACTAGCTCCATATGAGATTTTGTACATTAAACTGTGGAATGCGGAAGGTTCGACTGTGACTGCCCCAACAATTGTCCAGTCATCTGTTCTTCTGGAAGTTGGAAATCCTCCATCGATGCGACGACTGAAGCAGCTAGCTCAGACAATCTCTGGCTCTAATTCTAGCAACCTCGGCCTGAATAATACCGAGTTTGGAAAAGTGAAGCAAGTTCGCCTTTCGTCGATTCTTAAGCACTCCCTCAATGGCAGTGACGGCAACGGTCCCGTAAGGAGGTCTCCTTCTCCTGCTCCTACACCCCAGCCCCATAACTTCCATCACCCCCCGCCTCACCACCACCACCACCATCACACTCCTCTAACACCTGCAATTTCACCTGCCCCTGCATTAGAGATGGGTGCACCAGAATATGGTTCGCCTGCCCCCGAAAGTGCTGCATCGCCTAAGAAAAGTTACACAGCTAAGCCACCTGGTTGTCAATATAAGAGGAAGTCTGGTAGGAAAGAGGGAAAACAATCACATTTAACCCCGGTTGCTTCACCCAACATTTCTCCTATTCATTCTCCCGCATCGCCACCACCACGACATAAAGTATACCCACCTGCAGCACACGTCTCTCCAACTCCGGCATTAACTCCATTGCCAAACGTCATTTACGCTCATGTTCAACCGCCATCGAAAAGCGACTCCAGCCACCCTGGAAAATCCACAACAAATCCATCCATTGTGCCATCTCCATCACCATCACCATCACCATCACCATCTGGTGCCTATCGTCCCCGTACAATTACTCAATGGGGATTCATACCGTTTCTAATTATCGCATGCATCATGTAA 1533 47.68 MGKTDGEQPPPSAAASGEVPGGRCCSGCGSIRRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNPSYRGHDIVATFDVERPVSLLEDNIEQLRADIFGEFLIPSIKVDILSLESLSGSNRTKVVFGVDPDADDSEISSPFLSLIRSTVADIVANQSSLRITKSMFGDAFLFEVLKFPGGITIIPPQSAFLLQKVQILFNFTLNFSIHQIQVHFSELTSQLDAGLRLAPYEILYIKLWNAEGSTVTAPTIVQSSVLLEVGNPPSMRRLKQLAQTISGSNSSNLGLNNTEFGKVKQVRLSSILKHSLNGSDGNGPVRRSPSPAPTPQPHNFHHPPPHHHHHHHTPLTPAISPAPALEMGAPEYGSPAPESAASPKKSYTAKPPGCQYKRKSGRKEGKQSHLTPVASPNISPIHSPASPPPRHKVYPPAAHVSPTPALTPLPNVIYAHVQPPSKSDSSHPGKSTTNPSIVPSPSPSPSPSPSGAYRPRTITQWGFIPFLIIACIM 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15447579 15453307 + Sed0005077.2 Sed03g2128 707615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g2128 510 MobiDBLite consensus disorder prediction 1 21 - -
Sed03g2128 510 MobiDBLite consensus disorder prediction 453 490 - -
Sed03g2128 510 MobiDBLite consensus disorder prediction 418 432 - -
Sed03g2128 510 PANTHER F20B24.21 1 504 - -
Sed03g2128 510 MobiDBLite consensus disorder prediction 311 439 - -
Sed03g2128 510 MobiDBLite consensus disorder prediction 455 474 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2128 Sed-Chr3:15447579 Sed12g1162 Sed-Chr12:7706684 5.50E-91 dispersed
Sed03g2127 Sed-Chr3:15447579 Sed03g2128 Sed-Chr3:15447579 9.60E-261 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g2128 - - - 0.0