Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed03g2216 | ATGGAGACTAAACCCATTGAGATCAGTAAGTCAAAGATGTTTGGAGGGTACAACAGAAGATACCGCCATTACAGCCCAACTCTCGGCTGCTACATGAAATTCCACATCTACTTCCCTCCTTCTTCCCCTTCACACAAATTTCCGGTAATGTACTGGCTCACTGGCCTTGGTTGTACGGATGCGAATTTTATACTTAAGTACGGGGGTCAACGCACTGCTTCTAGTGAAGGTGTTGCATTAATTGTACCTGATACATCTCCAAGAGGCTTGAATGTTGAAGGAGAGGCCGACTATTGGAATCTTGGTGTCGGTGCTGGATTTTTTATCAATGCTACACAAGAAAAATGGAAAAATTGGCGTATGTATGATTATGTTGTCGAAGAGCTACCCAAACTTCTCAGTGAGAATTTTCCGCAACTTGATACATCTCGGGCATCTATATCGGGCCACTCTATGGGTGGACATGGGGCTCTAATAATCTACCTCAAAAACATGAACAAGTATAAGTCAGTATCTGCCTTAGCACCCCTTTACAATCCTATAAACAATCCCTTGTGCCAGAGGGCATTCACGAATTATTTAGGTAGCAACAAAGCTGACTGGGAGGAATACGATGCTTCTCATCTAATTTTAAAGTGCCACAATATATCTGCTACCATTTTTATTGATCAGGGGGATGATGATGAACACTTACATACAGAGTTGCTACCACGCAAGTTTCTAGAGGGCTGCAAGACTGTGAATGCTCCACTCCTCTTGAGGATGCAACCAGGTTACGATCACTCTAAAGATTTTGTTTCTACCTTCATTGAAGATCACATCCGTCACCATTCTCGAGCTCTTAGGCTTCCTTCAAGCTTGTAA | 864 | 42.82 | METKPIEISKSKMFGGYNRRYRHYSPTLGCYMKFHIYFPPSSPSHKFPVMYWLTGLGCTDANFILKYGGQRTASSEGVALIVPDTSPRGLNVEGEADYWNLGVGAGFFINATQEKWKNWRMYDYVVEELPKLLSENFPQLDTSRASISGHSMGGHGALIIYLKNMNKYKSVSALAPLYNPINNPLCQRAFTNYLGSNKADWEEYDASHLILKCHNISATIFIDQGDDDEHLHTELLPRKFLEGCKTVNAPLLLRMQPGYDHSKDFVSTFIEDHIRHHSRALRLPSSL | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 16517485 | 16537579 | - | Sed0024564.1 | Sed03g2216 | 707703 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed03g2216 | 287 | Gene3D | alpha/beta hydrolase | 7 | 284 | IPR029058 | - | |
Sed03g2216 | 287 | PANTHER | S-FORMYLGLUTATHIONE HYDROLASE | 4 | 282 | IPR014186 | GO:0005829(PANTHER)|GO:0018738(PANTHER)|GO:0018738(InterPro)|GO:0046294(InterPro) | |
Sed03g2216 | 287 | Pfam | Putative esterase | 25 | 275 | IPR000801 | - | |
Sed03g2216 | 287 | FunFam | S-formylglutathione hydrolase | 6 | 283 | - | - | |
Sed03g2216 | 287 | NCBIfam | S-formylglutathione hydrolase | 8 | 281 | IPR014186 | GO:0018738(InterPro)|GO:0046294(InterPro) | |
Sed03g2216 | 287 | SUPERFAMILY | alpha/beta-Hydrolases | 8 | 281 | IPR029058 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g2216 | Sed-Chr3:16517485 | Sed03g2218 | Sed-Chr3:16538911 | 4.60E-143 | dispersed | |
Sed03g2216 | Sed-Chr3:16517485 | Sed03g2217 | Sed-Chr3:16517485 | 4.60E-159 | tandem | |
Sed14g0130 | Sed-Chr14:1452632 | Sed03g2216 | Sed-Chr3:16517485 | 3.50E-135 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed03g2216 | K01070 | - | csv:101207741 | 471.085 |