Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g2217 ATGGAGACTAAACCCATTGAGATCAGTAAGTCAAAGATGTTTGGAGGGTACAACAGAAGATACCGCCATTACAGCCCAACTCTCGGCTGCTACATGAAATTCCACATCTACTTCCCTCCTTCTTCCCCTTCACACAAATTTCCGGTAATGTACTGGCTCACTGGCCTTGGTTGTACGGATGCGAATTTTATACTTAAGTACGGGGGTCAACGCACTGCTTCTAGTGAAGGTGTTGCATTAATTGTACCTGATACATCTCCAAGTGCTGGATTTTTTATCAATGCTACACAAGAAAAATGGAAAAATTGGCGTATGTATGATTATGTTGTCGAAGAGCTACCCAAACTTCTCAGTGAGAATTTTCCGCAACTTGATACATCTCGGGCATCTATATCGGGCCACTCTATGGGTGGACATGGGGCTCTAATAATCTACCTCAAAAACATGAACAAGTATAAGTCAGTATCTGCCTTAGCACCCCTTTACAATCCTATAAACAATCCCTTGTGCCAGAGGGCATTCACGAATTATTTAGGTAGCAACAAAGCTGACTGGGAGGAATACGATGCTTCTCATCTAATTTTAAAGTGCCACAATATATCTGCTACCATTTTTATTGATCAGGGGGATGATGATGAACACTTACATACAGAGTTGCTACCACGCAAGTTTCTAGAGGGCTGCAAGACTGTGAATGCTCCACTCCTCTTGAGGATGCAACCAGGTTACGATCACTCTAAAGATTTTGTTTCTACCTTCATTGAAGATCACATCCGTCACCATTCTCGAGCTCTTAGGCTTCCTTCAAGCTTGTAA 816 42.4 METKPIEISKSKMFGGYNRRYRHYSPTLGCYMKFHIYFPPSSPSHKFPVMYWLTGLGCTDANFILKYGGQRTASSEGVALIVPDTSPSAGFFINATQEKWKNWRMYDYVVEELPKLLSENFPQLDTSRASISGHSMGGHGALIIYLKNMNKYKSVSALAPLYNPINNPLCQRAFTNYLGSNKADWEEYDASHLILKCHNISATIFIDQGDDDEHLHTELLPRKFLEGCKTVNAPLLLRMQPGYDHSKDFVSTFIEDHIRHHSRALRLPSSL 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16517485 16537579 - Sed0024564.2 Sed03g2217 707704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g2217 271 NCBIfam S-formylglutathione hydrolase 8 265 IPR014186 GO:0018738(InterPro)|GO:0046294(InterPro)
Sed03g2217 271 PANTHER S-FORMYLGLUTATHIONE HYDROLASE 4 266 IPR014186 GO:0005829(PANTHER)|GO:0018738(PANTHER)|GO:0018738(InterPro)|GO:0046294(InterPro)
Sed03g2217 271 Pfam Putative esterase 25 259 IPR000801 -
Sed03g2217 271 SUPERFAMILY alpha/beta-Hydrolases 8 265 IPR029058 -
Sed03g2217 271 Gene3D alpha/beta hydrolase 7 268 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2217 Sed-Chr3:16517485 Sed14g0130 Sed-Chr14:1452632 2.20E-123 dispersed
Sed03g2216 Sed-Chr3:16517485 Sed03g2217 Sed-Chr3:16517485 4.60E-159 tandem
Sed03g2217 Sed-Chr3:16517485 Sed03g2218 Sed-Chr3:16538911 1.10E-130 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g2217 K01070 - csv:101207741 432.18