Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g2218 ATGGAGACTAAACCCATTGAGATCAGCAACTCGAAGATGTTCGGAGGGTACAACAGAAGATACCGCCATTACAGCCCAACTCTCGGCTGCTCCATGAACTTCTACGTCTACTTCCCTCCTTCTCATCTTCCCTCCCACAAATTCCCGATACTCTACTGGCTCACTGGCCTTAGTTGTACGGATGAGACTTTTATAATTAAGTCAGGGGCTCAACTCGCTGCTTCTAGGGAAGGTGTTGCATTAATTGTACCTGATACATCTCCAAGAGGCCTGAATGTGGAAGGAGAGGCTGATCATTGGGATTTTGGTGTCGGTGCTGGATTTTATCTCAATGCTACACAAGAAAAATGGAAAAATTGGCGTATGTATGATTATGTTGTCGATGAGCTACCCAAACTTCTCAGTGAGAATTTTCCACAACTTGATACATCTCGGGCATCTATATCGGGTCACTCTATGGGTGGGCATGGGGCTCTAACAATCTACCTGAAAAACATGAACAAGTTTAAGTCAGTATCTGCTTTAGCGCCGCTTTACAATCCTATAAACAGTCCAGTGGGCCAGAGGGCATTCACGAAATATTTAGGTAGCAACAAAGCTGACTGGGAGGAATATGATGCTACTTGTCTAATCTTAAAGTGTCACAATGTATCTGCTACCATTTTTATTGATCAGGGGGAGGATGATGAATACTTGCATTCACAGTTGCTACCACAAAAGTTCGAAGAGGCCTGCAGGGCTGTGAATGCTCCACTCCTCTTGAGGATGCAATCGGGCTACGATCACTCGTACTTTTTCGTTTCTACCATCATTGACGATCACATTCGTCACCATTCTCAGGCTCTCAGGCTTCCTTGA 858 44.76 METKPIEISNSKMFGGYNRRYRHYSPTLGCSMNFYVYFPPSHLPSHKFPILYWLTGLSCTDETFIIKSGAQLAASREGVALIVPDTSPRGLNVEGEADHWDFGVGAGFYLNATQEKWKNWRMYDYVVDELPKLLSENFPQLDTSRASISGHSMGGHGALTIYLKNMNKFKSVSALAPLYNPINSPVGQRAFTKYLGSNKADWEEYDATCLILKCHNVSATIFIDQGEDDEYLHSQLLPQKFEEACRAVNAPLLLRMQSGYDHSYFFVSTIIDDHIRHHSQALRLP 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16538911 16551498 - Sed0008486.1 Sed03g2218 707705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g2218 285 NCBIfam S-formylglutathione hydrolase 8 282 IPR014186 GO:0018738(InterPro)|GO:0046294(InterPro)
Sed03g2218 285 SUPERFAMILY alpha/beta-Hydrolases 8 282 IPR029058 -
Sed03g2218 285 Gene3D alpha/beta hydrolase 7 285 IPR029058 -
Sed03g2218 285 FunFam S-formylglutathione hydrolase 6 284 - -
Sed03g2218 285 PANTHER S-FORMYLGLUTATHIONE HYDROLASE 4 283 IPR014186 GO:0005829(PANTHER)|GO:0018738(PANTHER)|GO:0018738(InterPro)|GO:0046294(InterPro)
Sed03g2218 285 Pfam Putative esterase 25 276 IPR000801 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2216 Sed-Chr3:16517485 Sed03g2218 Sed-Chr3:16538911 4.60E-143 dispersed
Sed03g2218 Sed-Chr3:16538911 Sed14g0130 Sed-Chr14:1452632 2.50E-141 dispersed
Sed03g2217 Sed-Chr3:16517485 Sed03g2218 Sed-Chr3:16538911 1.10E-130 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g2218 K01070 - csv:101207741 497.278