Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed03g2277 | ATGGTTTCCATTCTCTTTCTTTTTCTTCTTCTTCTTCTTCCTCTCTCTCTCTCTGCAAATTCATCCTCCATTGCCACTCTGCAAAACCATCCTCTTAAGCATTATGTTGTTTACATGGGAAGTGGAGGAAGCAGCTATGGAGAAGCTGCTCAATTGGATTACCTTCAACTGTTGTCCTCTGTAATTCCAAGGAAAGAGAGGGATGTGGTCCACCAATACCACCATGCTTTCAAAGGCTTTTCAGCCTTGTTAACTGAGGAAGAAGCCTCTTCTCTTTCAGGTATTGATGGAATCGTGTCGGTGTTCCCCGATCCCACGCTTCAGCTCCACACTACACGTTCTTGGGATTTCTTGGACTCCATCGCCGGCCTCCGCCCTCCGACGACGACGCCGTCGCCGCCGCCTCATTCGACGGATGTCATCGTCGGCGTCATCGACACCGGGATTTGGCCGGAGTCTGAATCTTTCCACGACGAGGGGCTCGGAGAAATTCCTTCTAGATGGAAAGGAGTTTGTATGGAGGCGCCTGATTTCAAGAGCTCCAATTGCAACAGGAAGTTGATTGGTGCAAGATACTACAACTCCATAGAGTTCAATGGGAAAGATGATCGTGCTGGCGCGCCGAAGGGCTCACCGAGGGACTCCCTCGGCCATGGGACGCACACTTCGTCGATTGCTGCAGGAGCGAGAGTTCCCAATGCAAGTTACTTTGGCTTGGCAAGAGGGACGGCAAGGGGCGGTGGAGCTGCTTCTACACGGATTGCGACCTATAAGGTTTGCGCCGGCGTTGGCTGCTCTGGCGCTGCCATTCTTAAAGCCATGGATGATGCAGTCAAGGATGGAGTTGATATTATTTCGATCTCGATCGGGATTGGTTCCCCTTTGTTTCAATCTGATTATTTGAATGACCCAATTGCCATTGGAGCATTGCATTCCCAACTAATGGGAGTTTTGGTTGTCTGCTCTGGTGGAAATGATGGCCCTGATCCTAACACTGTGGGGAATATTGCTCCTTGGATTTTCACTGTTGGTGCTTCTAATATTGACAGAGATTTCCAGTCCACGGTGGTTCTTGGAAATGGCAACACTTTTCAGGGGACTGCTATAAATCTCTCTAATCTTACTAGCTCGAAGACTTATCCTCTTGTTTTTGGAAAGGACGCTGCTGCTAAATTTGCGCCCGTCTCAGAAGCAAGAAATTGTTATCCCGGATCGCTAGATCATGCCAAAGTTGCAGGTAAGATCGTTGTTTGCGTCTCCGATGACTTCAGTACTACAAGGACAATAAAGGAACTGGTTGTACAAGATGCTAAAGCCTTGGGGTTAATACTGATCAGCGATGCATCAAAAACTGTGCCATTGGATTCAAACATTTTCCCATTTACACAAATTGGGAATTCAGAAGGTCTCCAGATTCTTGAGTACATTAACTCCACCAAGAACCCAACAGCCACAATTCTCAGAACAGTGGAAGTTCCAAGACTTAAACCTGCTCCAACAGTGGCTTATTTCTCATCGAGAGGGCCATCGCCGCTTACTGAAAACATTCTCAAGCCTGATATCACGGCTCCAGGAATATCTATTTTAGCAGCTATGGTTCCGAAAAGTGATGCAGATAGCGGTCCAATTGGTAAGAAGCCCTCCAATTTTGCATTGAAATCCGGGACGTCAATGGCCTGTCCACACGTAGCAGGTGCTGCTGCATTCGTTAAATCAGCCCGTTACAATTGGAGTTCTTCCATGATCAAGTCCGCACTCATGACAACAGCAACTATATATGATAATCAAAGAAAGTTCATGAGAAACAGCACAAGCAACCCTTCAAATCCACATGAGATGGGAGCTGGAGAAATCAGCCCCATAAAAGCTGTTAATCCTGGATTAGTGTTCGAATCTACAAACGAAGATCTTCTGCGTTTCCTCTGCTATTACGGCTATTCTAACAAGATCATAAGATCTGTGTCGAAACAAAACTTCAGTTGTCCGAAAAATTCCAAGGAAGATCTTATCTCCAGTCTCAACTATCCATCCATCTCAATTGGCAAACTTGATAGAAAGCAAGCTGCCAAAGTAATAGAAAGAACAGTGACAAATGTAGGAGCCCCAAACACCACTTACATTGCCAAGGTTCATTCTTCAGAGGGTTTACTAGTGAAAGTAATACCAAATAAGATTGTTTTCTCGGAGAATGTAAAGAAAGTGACTTTCAAAGTCTCATTTTATGGCAAGGATGCTCGCAGTGGCTACAACTTCGGGTCGATAACATGGCGGGATGGTGTAAATTCGGTTCGTACTGTTTTTGCTGTTAATGTAGAATAA | 2319 | 45.71 | MVSILFLFLLLLLPLSLSANSSSIATLQNHPLKHYVVYMGSGGSSYGEAAQLDYLQLLSSVIPRKERDVVHQYHHAFKGFSALLTEEEASSLSGIDGIVSVFPDPTLQLHTTRSWDFLDSIAGLRPPTTTPSPPPHSTDVIVGVIDTGIWPESESFHDEGLGEIPSRWKGVCMEAPDFKSSNCNRKLIGARYYNSIEFNGKDDRAGAPKGSPRDSLGHGTHTSSIAAGARVPNASYFGLARGTARGGGAASTRIATYKVCAGVGCSGAAILKAMDDAVKDGVDIISISIGIGSPLFQSDYLNDPIAIGALHSQLMGVLVVCSGGNDGPDPNTVGNIAPWIFTVGASNIDRDFQSTVVLGNGNTFQGTAINLSNLTSSKTYPLVFGKDAAAKFAPVSEARNCYPGSLDHAKVAGKIVVCVSDDFSTTRTIKELVVQDAKALGLILISDASKTVPLDSNIFPFTQIGNSEGLQILEYINSTKNPTATILRTVEVPRLKPAPTVAYFSSRGPSPLTENILKPDITAPGISILAAMVPKSDADSGPIGKKPSNFALKSGTSMACPHVAGAAAFVKSARYNWSSSMIKSALMTTATIYDNQRKFMRNSTSNPSNPHEMGAGEISPIKAVNPGLVFESTNEDLLRFLCYYGYSNKIIRSVSKQNFSCPKNSKEDLISSLNYPSISIGKLDRKQAAKVIERTVTNVGAPNTTYIAKVHSSEGLLVKVIPNKIVFSENVKKVTFKVSFYGKDARSGYNFGSITWRDGVNSVRTVFAVNVE | 772 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 17157814 | 17165718 | + | Sed0021717.1 | Sed03g2277 | 707764 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed03g2277 | 772 | FunFam | Subtilisin-like protease SBT1.5 | 139 | 361 | - | - | |
Sed03g2277 | 772 | SUPERFAMILY | Subtilisin-like | 109 | 628 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed03g2277 | 772 | Gene3D | - | 349 | 493 | - | - | |
Sed03g2277 | 772 | Pfam | PA domain | 379 | 471 | IPR003137 | - | |
Sed03g2277 | 772 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 35 | 762 | IPR045051 | - | |
Sed03g2277 | 772 | Gene3D | Peptidase S8/S53 domain | 139 | 636 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed03g2277 | 772 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 17 | 110 | IPR037045 | - | |
Sed03g2277 | 772 | FunFam | subtilisin-like protease SBT1.5 | 349 | 492 | - | - | |
Sed03g2277 | 772 | Pfam | Peptidase inhibitor I9 | 35 | 110 | IPR010259 | - | |
Sed03g2277 | 772 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 114 | 624 | - | - | |
Sed03g2277 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 554 | 570 | IPR015500 | - | |
Sed03g2277 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 137 | 156 | IPR015500 | - | |
Sed03g2277 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 214 | 227 | IPR015500 | - | |
Sed03g2277 | 772 | CDD | PA_subtilisin_like | 355 | 486 | - | - | |
Sed03g2277 | 772 | Gene3D | - | 641 | 771 | - | - | |
Sed03g2277 | 772 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 555 | 565 | IPR023828 | - | |
Sed03g2277 | 772 | Pfam | Fibronectin type-III domain | 673 | 769 | IPR041469 | - | |
Sed03g2277 | 772 | MobiDBLite | consensus disorder prediction | 203 | 224 | - | - | |
Sed03g2277 | 772 | CDD | Peptidases_S8_3 | 107 | 591 | IPR034197 | - | |
Sed03g2277 | 772 | Pfam | Subtilase family | 138 | 602 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed01g2477 | Sed-Chr1:18525072 | Sed03g2277 | Sed-Chr3:17157814 | 1.40E-181 | dispersed | |
Sed03g2277 | Sed-Chr3:17157814 | Sed08g2884 | Sed-Chr8:39952090 | 3.60E-142 | dispersed | |
Sed03g2277 | Sed-Chr3:17157814 | Sed03g1334 | Sed-Chr3:8497376 | 1.10E-143 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed03g2277 | K25898 | - | csv:101220772 | 1254.97 |