Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g2298 ATGGCGGCGTTCTTGATGTTCACGTTACTTCTTTCCATATCCATTTCTTTTGCTTTTGAAGAAGCCAACTTCACCTTCAACGGTTTCAGGCATGGCAATCTCAGCCTCGACGGAGTCGCCCAGACTTCCAATGGCCTTTTGATTCTTACCAATTACGACTCCGTACAGCAAATCGGCCACGCTTTTTACCCCAACCCCATTCCCTTCAAAAACCAATCAAACAGTTCCTTTGTTTCCTCCTTCTCTACCACTTTCGTCTTCGCCATAAATTCCGATTACGACAACCCCGGCCATGGACTTGCCTTTGTCGTTTCTCCCTCGAGGGGTATACCCGGAGCTCGGTCAAGCCAAAGCCTCGGCTTGTTCAACGAGTCAACCAATGGAAAGGAAACAAATCACATCTTCGCGGTTGAACTCGACATTATTCTGAATACTGAACTTGAAGACATCAACAACAACCATGTCGGAATTGATATTAACGGACTGAAGTCGGAGACGGCCGCACCGGCGGGGTATAGGGTCAATGGCGAATTAACGAATTTGACGCTAATCAGTGGTCTGCCGATGCAAGTTTGGATGGAATATGATGGTATTGATAAGCAAATCGATGTTACGATGGCTCCAATTCATATAATCAATAAACCCAAGACCCCCCTTCTGTCCTTGGTGCGGGATTTGTCGTCGGTCTTCAACGACATTATGTACGTCGGATTCTCGTCTTCAACAGGCTCCTCTAAGACGTGGCATTACATTCTGGGTTGGAGCTTTACAATCAATGGTCAAGCGCAGAGGCTTGATTTGTCTCAACTTCCTAAGCTTCCACCTGCAAAAACACCAACATCTAAACTCCTGACGATTGGGTTACCCTCGATTTGTGCTTTAGCAGCTTTCATGGCAGTTTCCGGACCTCGCCTTGCTTCGATGGCGGCTCTCTGGTAG 939 47.28 MAAFLMFTLLLSISISFAFEEANFTFNGFRHGNLSLDGVAQTSNGLLILTNYDSVQQIGHAFYPNPIPFKNQSNSSFVSSFSTTFVFAINSDYDNPGHGLAFVVSPSRGIPGARSSQSLGLFNESTNGKETNHIFAVELDIILNTELEDINNNHVGIDINGLKSETAAPAGYRVNGELTNLTLISGLPMQVWMEYDGIDKQIDVTMAPIHIINKPKTPLLSLVRDLSSVFNDIMYVGFSSSTGSSKTWHYILGWSFTINGQAQRLDLSQLPKLPPAKTPTSKLLTIGLPSICALAAFMAVSGPRLASMAALW 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17691314 17692252 - Sed0021734.1 Sed03g2298 707785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g2298 312 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 276 IPR013320 -
Sed03g2298 312 CDD lectin_legume_LecRK_Arcelin_ConA 23 260 IPR001220 GO:0030246(InterPro)
Sed03g2298 312 PIRSF Plant_L_lectin 1 265 IPR016363 GO:0030246(InterPro)
Sed03g2298 312 Gene3D - 20 270 - -
Sed03g2298 312 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 7 290 IPR050258 -
Sed03g2298 312 Pfam Legume lectin domain 22 271 IPR001220 GO:0030246(InterPro)
Sed03g2298 312 FunFam L-type lectin-domain containing receptor kinase V.9 21 263 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2298 Sed-Chr3:17691314 Sed14g0524 Sed-Chr14:5196773 4.10E-97 dispersed
Sed03g2297 Sed-Chr3:17653213 Sed03g2298 Sed-Chr3:17691314 6.30E-127 tandem
Sed03g2298 Sed-Chr3:17691314 Sed04g1243 Sed-Chr4:26168213 4.90E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g2298 - - - 0.0