Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed03g2333 | ATGGCGGAACAGCTACAACTCTTCGGGTTCCGATCGGGCCCCTTCAGTTTGAGAGTGGAGTTGGCTCTCAAACTCAAAGGCGTCGATTACGAACACATCGAAGAAGATTTGCTCAACAACAACAAAAGCGATTTGCTTTTGCAATACAACCCAGTTTACCAGAAGGTGCCTGTTCTCGTCCATAATGGCAACCCCATTTCGGAGTCGCTGGTCATCCTTGAATACATCGAACAAGTTTGGACTCAAAATCCTATCTTTCCACAAGACCCCTACCACAAATCTCTTGCTAGGTTTTGGGCCAAGTATATGGATGATAAGGTTTTGCCTATAATGAAGAAAATTGCACAAAGCAAGGAAGAAGAGAGGGAGAAAGTTATAGAAGAAGGGCAGGAGGCATTGGAACCATTAGAGAAAGAGCTTGGAAACAAGAAATTCTTCTTTGGAGATGAAATTGGATTTGTGGACATTGTAGGCATTGTTATAGCCTGTTGGATACCTGCCAGTGAAGAAGCTTTAGGTTTTGAGTTGCTAATAAGTCACAAGTTCCCAAAGTTAAAAGCATGGAGTGAAGAGTTTGTGAACCATAGTGTGGCCAAGTTGGTGTTGCCCCAAAAGGATGTGCTTGTTGCCTTTTTGAAAATGGTTACCTCTAATCCCAAAAACTAA | 666 | 42.64 | MAEQLQLFGFRSGPFSLRVELALKLKGVDYEHIEEDLLNNNKSDLLLQYNPVYQKVPVLVHNGNPISESLVILEYIEQVWTQNPIFPQDPYHKSLARFWAKYMDDKVLPIMKKIAQSKEEEREKVIEEGQEALEPLEKELGNKKFFFGDEIGFVDIVGIVIACWIPASEEALGFELLISHKFPKLKAWSEEFVNHSVAKLVLPQKDVLVAFLKMVTSNPKN | 221 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 18685475 | 18689474 | + | Sed0023394.1 | Sed03g2333 | 707820 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed03g2333 | 221 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 5 | 213 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Sed03g2333 | 221 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 209 | IPR010987 | - | |
Sed03g2333 | 221 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 84 | IPR004045 | - | |
Sed03g2333 | 221 | FunFam | Tau class glutathione S-transferase | 1 | 88 | - | - | |
Sed03g2333 | 221 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 77 | IPR004045 | - | |
Sed03g2333 | 221 | SUPERFAMILY | GST C-terminal domain-like | 78 | 215 | IPR036282 | - | |
Sed03g2333 | 221 | Pfam | Glutathione S-transferase, C-terminal domain | 98 | 194 | IPR004046 | - | |
Sed03g2333 | 221 | Gene3D | - | 86 | 220 | - | - | |
Sed03g2333 | 221 | FunFam | Tau class glutathione S-transferase | 86 | 221 | - | - | |
Sed03g2333 | 221 | CDD | GST_N_Tau | 5 | 80 | - | - | |
Sed03g2333 | 221 | Gene3D | Glutaredoxin | 1 | 85 | - | - | |
Sed03g2333 | 221 | SFLD | Main.3: Omega- and Tau-like | 2 | 216 | IPR045073 | - | |
Sed03g2333 | 221 | CDD | GST_C_Tau | 90 | 213 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Sed03g2333 | 221 | SFLD | Glutathione Transferase (cytosolic) | 2 | 216 | IPR040079 | - | |
Sed03g2333 | 221 | SUPERFAMILY | Thioredoxin-like | 4 | 107 | IPR036249 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g2333 | Sed-Chr3:18685475 | Sed14g0672 | Sed-Chr14:6755120 | 2.00E-69 | dispersed | |
Sed03g2329 | Sed-Chr3:18578405 | Sed03g2333 | Sed-Chr3:18685475 | 1.00E-60 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed03g2333 | K00799 | - | csv:101215228 | 310.457 |