Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed03g2360 | ATGGTGGGTCTCGGACTACCACAAATTGCTCAAAGCTTGAGATCCCAAGCATGGAGTGATGAGGACCTTTTGGAGGCTTTAAATCAACTAGAAGAGGGGCTGAAAGATGATATCAGGAAACTAAGTTCTTTTGACAAGTATAAGCAAGAAGTCCTTCTAGGCCAACTTGACTGGTCTCCTACACAAAAGATGTTAATTTCTGGCATTTTAAGGGTCCTAATGACCATTCTGGACACTTCGAGTGACCCAAGGGCTCTGTCAGTGGCTTGCTTTGATCTTTCACAGTTCATGACAGATCTCAAGGCCAAGGAAAGAGTGATGAAACTGATGAATCATGGGAATGCTGAAGTTACCAAATACTCCCTCCTCTGCACCCAAAGAGCCAAGTATGCAAGCTAG | 399 | 44.11 | MVGLGLPQIAQSLRSQAWSDEDLLEALNQLEEGLKDDIRKLSSFDKYKQEVLLGQLDWSPTQKMLISGILRVLMTILDTSSDPRALSVACFDLSQFMTDLKAKERVMKLMNHGNAEVTKYSLLCTQRAKYAS | 132 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 19106031 | 19107093 | - | Sed0024694.1 | Sed03g2360 | 707847 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed03g2360 | 132 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT H | 1 | 61 | IPR004908 | GO:0000221(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
Sed03g2360 | 132 | Gene3D | - | 21 | 130 | IPR038497 | - | |
Sed03g2360 | 132 | Pfam | V-ATPase subunit H | 40 | 127 | IPR011987 | GO:0000221(InterPro)|GO:1902600(InterPro) | |
Sed03g2360 | 132 | SUPERFAMILY | ARM repeat | 1 | 127 | IPR016024 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g2360 | Sed-Chr3:19106031 | Sed03g3114 | Sed-Chr3:47868056 | 6.90E-54 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed03g2360 | K02144 | - | csv:101217015 | 198.749 |