Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g2568 ATGTCTTCCGCTGAGAAGGAGAGAGAGACTCAGGTCTACATGGCCAAGCTCGCCGAGCAGGCCGAGCGCTACGACGAAATGGTTGAGTGCATGAAGAATATTGCGAAGCTTGACCTCGAACTGACCGTGGAGGAGAGGAACCTTCTTTCTGTGGGGTACAAAAATGTCATAGGTGCACGGCGAGCCTCTTGGCGCATCATGTCTTCGATTGAGCAGAAAGAGGAGTCCAAGGGGAATGAGAACATTGTAAAATTGATTAAGGGTTATGGCCAGAAAGTGGAGGAGGAGCTTTCAAAGATCTGTGGTGATATTCTCTCTATCATAGACAAGCATCTCATCCCTCATTCTTCCTCTGCAGAAGCCACTGTTTTCTACTACAAGATGAAAGGTGACTACTATCGATATCTTGCCGAGTTCAAGACAGATCAAGATAGGAAAGAGGCTGCTGATCAGTCATTGAAGGGATATGAGGCTGCCATGGGCACTGCGAATACTGATCTCCCATCAACACACCCCATCCGACTTGGCCTTGCTCTCAATTTTTCTGTCTTCTACTATGAGATTATGAATTCTCCCGAGAGAGCTTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGATACCTTGAGTGAAGAATCATACAAGGACAGCACTCTGATCATGCAGCTGTTGAGAGACAACCTCACCCTCTGGACCTCAGATTTGCCTGAAGATGGCGGTGAAGAAAACTTCAAAGCTGAGGATTCCAAGCCTGCTGAAGGCGAAGCCCAGTCCGCCAGATGA 795 47.67 MSSAEKERETQVYMAKLAEQAERYDEMVECMKNIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENIVKLIKGYGQKVEEELSKICGDILSIIDKHLIPHSSSAEATVFYYKMKGDYYRYLAEFKTDQDRKEAADQSLKGYEAAMGTANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENFKAEDSKPAEGEAQSAR 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 41061357 41064868 - Sed0004356.1 Sed03g2568 708055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g2568 264 SMART 1433_4 8 249 IPR023410 -
Sed03g2568 264 Coils Coil 14 34 - -
Sed03g2568 264 Pfam 14-3-3 protein 14 236 IPR023410 -
Sed03g2568 264 PANTHER 14-3-3 PROTEIN 7 241 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Sed03g2568 264 FunFam 14-3-3 protein epsilon 3 250 - -
Sed03g2568 264 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Sed03g2568 264 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Sed03g2568 264 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Sed03g2568 264 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Sed03g2568 264 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Sed03g2568 264 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Sed03g2568 264 Gene3D - 1 249 IPR036815 -
Sed03g2568 264 MobiDBLite consensus disorder prediction 238 264 - -
Sed03g2568 264 MobiDBLite consensus disorder prediction 242 258 - -
Sed03g2568 264 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Sed03g2568 264 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Sed03g2568 264 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Sed03g2568 264 PIRSF 14-3-3 2 249 IPR000308 -
Sed03g2568 264 Coils Coil 196 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2568 Sed-Chr3:41061357 Sed04g0091 Sed-Chr4:543909 7.00E-138 dispersed
Sed03g2568 Sed-Chr3:41061357 Sed03g2569 Sed-Chr3:41061357 1.70E-131 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g2568 K06630 - csv:101221858 503.442