Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g2569 ATGGTTGAGTGCATGAAGAATATTGCGAAGCTTGACCTCGAACTGACCGTGGAGGAGAGGAACCTTCTTTCTGTGGGGTACAAAAATGTCATAGGTGCACGGCGAGCCTCTTGGCGCATCATGTCTTCGATTGAGCAGAAAGAGGAGTCCAAGGGGAATGAGAACATTGTAAAATTGATTAAGGGTTATGGCCAGAAAGTGGAGGAGGAGCTTTCAAAGATCTGTGGTGATATTCTCTCTATCATAGACAAGCATCTCATCCCTCATTCTTCCTCTGCAGAAGCCACTGTTTTCTACTACAAGATGAAAGGTGACTACTATCGATATCTTGCCGAGTTCAAGACAGATCAAGATAGGAAAGAGGCTGCTGATCAGTCATTGAAGGGATATGAGGCTGCCATGGGCACTGCGAATACTGATCTCCCATCAACACACCCCATCCGACTTGGCCTTGCTCTCAATTTTTCTGTCTTCTACTATGAGATTATGAATTCTCCCGAGAGAGCTTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGATACCTTGAGTGAAGAATCATACAAGGACAGCACTCTGATCATGCAGCTGTTGAGAGACAACCTCACCCTCTGGACCTCAGATTTGCCTGAAGATGGCGGTGAAGAAAACTTCAAAGCTGAGGATTCCAAGCCTGCTGAAGGCGAAGCCCAGTCCGCCAGATGA 717 46.44 MVECMKNIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENIVKLIKGYGQKVEEELSKICGDILSIIDKHLIPHSSSAEATVFYYKMKGDYYRYLAEFKTDQDRKEAADQSLKGYEAAMGTANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENFKAEDSKPAEGEAQSAR 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 41061357 41064868 - Sed0004356.2 Sed03g2569 708056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g2569 238 SMART 1433_4 1 223 IPR023410 -
Sed03g2569 238 MobiDBLite consensus disorder prediction 212 238 - -
Sed03g2569 238 SUPERFAMILY 14-3-3 protein 2 217 IPR036815 -
Sed03g2569 238 MobiDBLite consensus disorder prediction 216 232 - -
Sed03g2569 238 ProSitePatterns 14-3-3 proteins signature 1. 20 30 IPR023409 -
Sed03g2569 238 ProSitePatterns 14-3-3 proteins signature 2. 192 211 IPR023409 -
Sed03g2569 238 Coils Coil 170 190 - -
Sed03g2569 238 FunFam 14-3-3 gamma 1 1 220 - -
Sed03g2569 238 PANTHER 14-3-3 PROTEIN 1 215 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Sed03g2569 238 Pfam 14-3-3 protein 1 210 IPR023410 -
Sed03g2569 238 Gene3D - 1 223 IPR036815 -
Sed03g2569 238 PRINTS 14-3-3 protein zeta signature 94 116 IPR000308 -
Sed03g2569 238 PRINTS 14-3-3 protein zeta signature 156 182 IPR000308 -
Sed03g2569 238 PRINTS 14-3-3 protein zeta signature 63 87 IPR000308 -
Sed03g2569 238 PRINTS 14-3-3 protein zeta signature 129 155 IPR000308 -
Sed03g2569 238 PRINTS 14-3-3 protein zeta signature 14 43 IPR000308 -
Sed03g2569 238 PRINTS 14-3-3 protein zeta signature 183 212 IPR000308 -
Sed03g2569 238 PIRSF 14-3-3 1 223 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2569 Sed-Chr3:41061357 Sed04g0091 Sed-Chr4:543909 1.40E-124 dispersed
Sed03g2568 Sed-Chr3:41061357 Sed03g2569 Sed-Chr3:41061357 1.70E-131 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g2569 K06630 - csv:101221858 454.521