Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g2696 ATGGATCTCGAAACTGGGTTTTATCCCAACTCTGCAAAGAGCCATTCATGGAAGACAGTTCTGACTCTAGCCTTTCAGAGTCTTGGCGTCGTTTATGGCGATTTAAGCATTTCACCTCTTTACGTGTACCGGAACACTTTTGCTGAAGAGGATATTGAACATTCAAACACCAACGAAGAGATTTATGGGGTTTTGTCATTCGTTTTCTGGACTCTTACTATTGTTCCTTTGTTTAAATATGTGTTTATTGTGCTTAAAGCTGATGATAATGGCGAGGGTGGGACTTTTGCTCTCTATTCATTGTTGTGTCGACATGCCCAACTCAGCTCCTTGCCCAATGCTCAAGTTGCTGATGAGGAGTTGGCTGAGTACAAGAAGGACAGCATAATTTTACCACCCAGAAAAAGCTTTGCATCAAAGCTGAAATCCATGTTTCAAACGCATAAGGTGTTGCAGAGATTTTTGCTCATTCTTGCGTTGATTGGGACTTGCATGGTCATTGGCGATGGCATCCTAACGCCTGCTATTTCTGTTTTTTCTGCTGTCTCTGGACTGGAGTTTACGATGTCGAAAGAGCATCATAAATATGTGGAAGTTCCAGCTGCATGCATCATACTGATAGGCTTGTTCGCCCTTCAACATTATGGAACCCACAGGGTTGGATTCTTGTTTGCTCCTATAGTGACAGCATGGCTTTTGTGCATTAGTGTAATTGGTTTATACAATGTTATTCATTGGAATCCTCATGTTTATCAAGCTCTTTCACCTTATTATATGTTCCAATTCTTGAAGAAAACACAGAGAGGAGGTTGGATGTCACTTGGAGGGATTCTACTTTGTATAACTGGTTCAGAGGCTATGTTTGCTGATCTTGGACACTTTTCACAAGCATCCATTCAGATTGCATTTAGCTTTATGGTCTATCCAGCTTTGGTTTTAGCTTATATGGGACAGGCTGCCTATTTATCTCAACATCATTCGATACCAAATGATTATCGAATTGGATTCTATATGTCTGTTCCAGAGAAGGTACGTTGGCCTGTTCTAGTAATTGCCATACTTGCTGCTGTAGTAGGAAGCCAGGCCATCATCACTGGAACTTTCTCGATCATTAAGCAATGTTCTGCTTTGAATTGCTTCCCCAGAGTCAAAATAGTTCATACATCAACTAAAATTCATGGTCAAATATACATCCCTGAGATTAATTGGATATTGATGGTGTTATGCTTGGCCGTTACAATTGGTTTCAGAGACACAAAGCGTTTGGGTAATGCATCAGGTTTGGCAGTAATCACAGTGATGTTGGTCACTACCTGCTTAATGTCTTTAGTAATTGTCCTTTGCTGGCACCGAAGTGTTGTCCTTGCAATTTGCTTTGTGCTCTTCTTTGGGTCAATTGAAGCCATGTATTTTTCAGCTTCTCTCATTAAGTTTCTTGAAGGAGCATGGGTTCCCATTGCACTTGCGATGGTGTTCATAATTATCATGTATGTCTGGCACTATGGAACCTTGAAGAAGTATGAATTTGATTTTCAAAATAAGGTGTCAATTAATTGGTTACTTAGTGTGGGATCCAGTCTAGGCATTGTGCGAGTCCGGGGTATTGGCATTGTGCACACTGAACTTGTGTCAGGAATCCCAGCAATATTTTCCCATTTTGTTACAAACCTTCCTGCCTTTCACCAGGTCGTTGTTTTTCTTTGCATCAAATCTGTCCCAGTTCCACATGTTAAAGCTGAAGAGCGGTTCCTGGTTGGTCGAATCGGACCTGGTGAGTTTAGGTTGTATAGGTGCATTGTGCGATATGGATACAGGGATGTGCATAAGGATGATACAGAGTTTGAAAAGGATCTTGTATGTAGCATAGCCGAGTTCATAAGATCGGAGAAGATGGAATTCAGTGGTTGTAATATAGATGATAGGAAGGAAAGTGACAAAATGACAGTAGTTGGAACATGTTCTACGCACACAGATGGAATTCAAATGCAAGAGGAAGAGGGTGAAGAAGAGTTGGGTGGCACATCGGAGCAGAGGGAAATAAGATCAACACGTATTGTCGAACCACCGAGGAAAAGGGTGAGGTTTATTCTGCCAGAGAGTCCAAAAATTGAGCTGACAGCAATGGAGGAACTGAAGGAGTTGATGGAAGCAAGGGAAGCAGGAGTTGCTTACATATTGGGTCACGCGCATATGAAAGCGAAGCAGGGATCGAGCATGCTAAGAAAGCTTATTATTAATTATGGGTATGAAGTGTTAAGAAGAAATAGCAGGGGACCAAACTATCCCCTCAATTTACCACATGCGTCTACTCTTGAGGTAGGAATGGTGTATCATGTCTGA 2340 41.58 MDLETGFYPNSAKSHSWKTVLTLAFQSLGVVYGDLSISPLYVYRNTFAEEDIEHSNTNEEIYGVLSFVFWTLTIVPLFKYVFIVLKADDNGEGGTFALYSLLCRHAQLSSLPNAQVADEELAEYKKDSIILPPRKSFASKLKSMFQTHKVLQRFLLILALIGTCMVIGDGILTPAISVFSAVSGLEFTMSKEHHKYVEVPAACIILIGLFALQHYGTHRVGFLFAPIVTAWLLCISVIGLYNVIHWNPHVYQALSPYYMFQFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQASIQIAFSFMVYPALVLAYMGQAAYLSQHHSIPNDYRIGFYMSVPEKVRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALNCFPRVKIVHTSTKIHGQIYIPEINWILMVLCLAVTIGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHRSVVLAICFVLFFGSIEAMYFSASLIKFLEGAWVPIALAMVFIIIMYVWHYGTLKKYEFDFQNKVSINWLLSVGSSLGIVRVRGIGIVHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVKAEERFLVGRIGPGEFRLYRCIVRYGYRDVHKDDTEFEKDLVCSIAEFIRSEKMEFSGCNIDDRKESDKMTVVGTCSTHTDGIQMQEEEGEEELGGTSEQREIRSTRIVEPPRKRVRFILPESPKIELTAMEELKELMEAREAGVAYILGHAHMKAKQGSSMLRKLIINYGYEVLRRNSRGPNYPLNLPHASTLEVGMVYHV 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 43271128 43281908 + Sed0000273.1 Sed03g2696 708183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g2696 779 Pfam K+ potassium transporter integral membrane domain 23 521 IPR053951 -
Sed03g2696 779 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 779 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed03g2696 779 NCBIfam potassium uptake protein 23 779 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed03g2696 779 Pfam K+ potassium transporter C-terminal domain 534 778 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2696 Sed-Chr3:43271128 Sed06g0572 Sed-Chr6:5021405 0.00E+00 dispersed
Sed03g2696 Sed-Chr3:43271128 Sed04g0640 Sed-Chr4:4946677 0.00E+00 wgd
Sed03g2696 Sed-Chr3:43271128 Sed06g1625 Sed-Chr6:41035090 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g2696 K03549 - rcu:8261016 1269.22