Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g2804 ATGGTGGTGAATTTTCAGCGAACAGTTCTTGTGTTTTTTGTTCTTCTTGTTGTTGGGAAGGCCGAAATTTACATTGTCACCATTGACGGAGAACCTATTGTGAGTTACAAAGGTGATCTGGATGGATTTGAAGCCACGGCAGTGGAATCTGATGAAAAGATCGACCCTACCAGTGAAATTGTGACTTCCTATGCTCGTCACCTTGAAAATAAACATGACATGCTTCTTGGGATGTTGTTTGAGAGAGGATCCTTCCAGAAACTCTATAGTTATAAGCATCTCATCAATGGATTTGCAGTCGATATCTCACATGAACAGGCAGAGATTCTAAGACATACCCCAATTGTAAAATCTGTTGAGAGAGACTGGAAGGTTAGAAAATTAACAACACACACACCAGAGTTCTTGGGCCTTCCAACTGGCGTATGGCCAACCGGTGGCGGCTTTGACAGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATATATCCTCATCATCCAAGTTTTGCTACGTATAATACCGAACCTTTTGGGCCATGCTCGAAGTATAAAGGGAAATGCGAAGTTGACCCCGACACCAAGAAGGATTTTTGTAATGGAAAGATTGTTGGAGCTCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGGGCATTTAATCCATCTATTCATTTTGCATCTCCTTTGGATGGAGATGGACATGGAAGCCATACAGCAGCAATTGCAGCTGGTAATAATGGAATTCCTGTGAGAATGCATGGATATGAATTTGGTAAAGCAAGTGGGATGGCTCCCCGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGGATTTTTGGAGGATTTGTTGCTGATGTAGTGGCAGCTATTGATCAGGCTGTACATGACGGGGTCGATATTCTCAGTCTTTCAGTGGGGCCAAATAGTCCTCCTACAACTACCAAGATCACATATTTAAACCCTTTTGATGCTACCCTTCTTTCAGCTGTGAAGGCTGGTGTATTTGTTGCACAAGCCGCTGGAAATGGAGGTCCATTTCCTAAAACATTGGTGTCGTATAGTCCATGGATAGCATCTGTTGCAGCTGCAATTGACGATAGACGTTACAAAAACCATCTGACACTTGGCAATGGAAAAATCTTGGCTGGACTTGGGTTATCACCGGCTACACATTTAAACCGAACGTACACATTGGTCGCAGCCAATGACGTGCTGTTAGATTCTTCAGTAATGAAGTACAGCCCTTCAGACTGCCAAAGGCCAGAAGTTCTAAACAAACGATTAGTTGAAGGAAAAGTTCTTCTTTGTGGTTATTCATTCGGTTTCGTTGTTGGCACTGCTTCAATCAAAAGGGTTTCTCAAACTGCAAAAGCCCTTGGTGCAGCTGGCTTTGTTCTTGCTGTAGAAAACATCTCTCCTGGAACAAAATTCGACCCTGTTCCTGTTGGCATTCCTGGGATTCTTATAACTGATGTCAGCAAGTCGATGGATCTAATAGACTACTACAACACCTCTACACCCAGAGACTGGACGGGTCGGGTCAAGAGCTTTGATGCTGTGGGTGGCATTGGGGATGGTTTGATTCCTTTATTATACAAATCTGCACCTGAGGTAGCATTATTTTCTGCTCGTGGGCCGAATATTAGAGACTTTAGCTTTCAGGATGCAGACCTTCTCAAACCAGATATTCTAGCTCCCGGTTCTTTGATATGGGCTGCTTGGTCTCCAAATGGTACAGACGAGCCGAACTATGCTGGAGAGGGATTTGCTATGATTTCTGGAACGAGCATGGCAGCCCCGCACATAGCTGGTATAGCAGCTCTTGTAAAACAGAAGTATCCTAACTGGAGTCCTGCAGCTATCAAATCGGCTTTGATGACGACATCAAAAACGATGGACAGAGGAGGAAGACCTCTTAAGGCACAACAATATTCTGAAACAGAAGCCATGAAACTGGTACCTGCAACACCTTTTGATTATGGGAGTGGTCATGTTAACCCAAGAGCAGCACTGGATCCTGGACTCATCTTTGATGCAGGCTATGAAGACTACTTGGGATTTTTGTGCACGACCGCGGGAATCAACGCTCACGAGATACACAACTACACAAACTCACCTTGCAACTTCACCATGGGCCATCCCTGGAATCTCAACAGCCCATCAATCACCATTGCCCATCTTGTGGGAAGTCAGACTGTTACTCGCACAGTAACAAATGTTGCTGCAGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTATTGCCATAGAAACAAATCCTCCAGCAATGACTTTACTATCCGGTTCATCGAGAAAATTTACAGTAACGCTCACAGCTCGATCACTGACCGGATCATATAGTTTTGGGGAGGTTGTATTGAAGGGCAGTAGGGGACACAAAGTTAGAATACCCGTAGTAGCCATGGGATAA 2442 44.31 MVVNFQRTVLVFFVLLVVGKAEIYIVTIDGEPIVSYKGDLDGFEATAVESDEKIDPTSEIVTSYARHLENKHDMLLGMLFERGSFQKLYSYKHLINGFAVDISHEQAEILRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCSKYKGKCEVDPDTKKDFCNGKIVGAQHFAEAAKAAGAFNPSIHFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPTTTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVMKYSPSDCQRPEVLNKRLVEGKVLLCGYSFGFVVGTASIKRVSQTAKALGAAGFVLAVENISPGTKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGGIGDGLIPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYAGEGFAMISGTSMAAPHIAGIAALVKQKYPNWSPAAIKSALMTTSKTMDRGGRPLKAQQYSETEAMKLVPATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINAHEIHNYTNSPCNFTMGHPWNLNSPSITIAHLVGSQTVTRTVTNVAAEETYTITARMDPAIAIETNPPAMTLLSGSSRKFTVTLTARSLTGSYSFGEVVLKGSRGHKVRIPVVAMG 813
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 44867837 44876618 + Sed0018477.1 Sed03g2804 708291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g2804 813 Pfam PA domain 397 492 IPR003137 -
Sed03g2804 813 ProSitePatterns Serine proteases, subtilase family, serine active site. 596 606 IPR023828 -
Sed03g2804 813 Pfam Fibronectin type-III domain 718 810 IPR041469 -
Sed03g2804 813 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 158 169 IPR023827 -
Sed03g2804 813 Pfam Subtilase family 153 634 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed03g2804 813 PRINTS Subtilisin serine protease family (S8) signature 232 245 IPR015500 -
Sed03g2804 813 PRINTS Subtilisin serine protease family (S8) signature 595 611 IPR015500 -
Sed03g2804 813 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Sed03g2804 813 FunFam Subtilisin-like protease SBT1.5 155 377 - -
Sed03g2804 813 SUPERFAMILY Protease propeptides/inhibitors 85 126 - -
Sed03g2804 813 Gene3D Peptidase S8/S53 domain 155 686 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed03g2804 813 Gene3D - 690 812 - -
Sed03g2804 813 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 72 777 IPR045051 -
Sed03g2804 813 SUPERFAMILY Subtilisin-like 128 677 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed03g2804 813 Gene3D - 368 533 - -
Sed03g2804 813 CDD PA_subtilisin_like 375 513 - -
Sed03g2804 813 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 128 IPR037045 -
Sed03g2804 813 ProSiteProfiles Serine proteases, subtilase domain profile. 122 673 - -
Sed03g2804 813 CDD Peptidases_S8_3 129 631 IPR034197 -
Sed03g2804 813 Pfam Peptidase inhibitor I9 24 126 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2804 Sed-Chr3:44867837 Sed03g2806 Sed-Chr3:44867837 0.00E+00 dispersed
Sed03g2804 Sed-Chr3:44867837 Sed03g2805 Sed-Chr3:44867837 0.00E+00 tandem
Sed01g2002 Sed-Chr1:14952009 Sed03g2804 Sed-Chr3:44867837 2.00E-161 transposed
Sed11g0573 Sed-Chr11:6269540 Sed03g2804 Sed-Chr3:44867837 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g2804 - - - 0.0