Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g2807 ATGGCCTCTGGGCCAAGAGGACAGGGTGAAATTGTGACTTCCTATGCTCGTCACCTTGAAAATAAACATGACATGCTTCTTGGGATGTTGTTTGAGAGAGGATCCTTCCAGAAACTCTATAGTTATAAGCATCTCATCAATGGATTTGCAGTCGATATCTCACATGAACAGGCAGAGATTCTAAGACATACCCCAATTGTAAAATCTGTTGAGAGAGACTGGAAGGTTAGAAAATTAACAACACACACACCAGAGTTCTTGGGCCTTCCAACTGGCGTATGGCCAACCGGTGGCGGCTTTGACAGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATATATCCTCATCATCCAAGTTTTGCTACGTATAATACCGAACCTTTTGGGCCATGCTCGAAGTATAAAGGGAAATGCGAAGTTGACCCCGACACCAAGAAGGATTTTTGTAATGGAAAGATTGTTGGAGCTCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGGGCATTTAATCCATCTATTCATTTTGCATCTCCTTTGGATGGAGATGGACATGGAAGCCATACAGCAGCAATTGCAGCTGGTAATAATGGAATTCCTGTGAGAATGCATGGATATGAATTTGGTAAAGCAAGTGGGATGGCTCCCCGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGGATTTTTGGAGGATTTGTTGCTGATGTAGTGGCAGCTATTGATCAGGCTGTACATGACGGGGTCGATATTCTCAGTCTTTCAGTGGGGCCAAATAGTCCTCCTACAACTACCAAGATCACATATTTAAACCCTTTTGATGCTACCCTTCTTTCAGCTGTGAAGGCTGGTGTATTTGTTGCACAAGCCGCTGGAAATGGAGGTCCATTTCCTAAAACATTGGTGTCGTATAGTCCATGGATAGCATCTGTTGCAGCTGCAATTGACGATAGACGTTACAAAAACCATCTGACACTTGGCAATGGAAAAATCTTGGCTGGACTTGGGTTATCACCGGCTACACATTTAAACCGAACGTACACATTGGTCGCAGCCAATGACGTGCTGTTAGATTCTTCAGTAATGAAGTACAGCCCTTCAGACTGCCAAAGGCCAGAAGTTCTAAACAAACGATTAGTTGAAGGAAAAGTTCTTCTTTGTGGTTATTCATTCGGTTTCGTTGTTGGCACTGCTTCAATCAAAAGGGTTTCTCAAACTGCAAAAGCCCTTGGTGCAGCTGGCTTTGTTCTTGCTGTAGAAAACATCTCTCCTGGAACAAAATTCGACCCTGTTCCTGTTGGCATTCCTGGGATTCTTATAACTGATGTCAGCAAGTCGATGGATCTAATAGACTACTACAACACCTCTACACCCAGAGACTGGACGGGTCGGGTCAAGAGCTTTGATGCTGTGGGTGGCATTGGGGATGGTTTGATTCCTTTATTATACAAATCTGCACCTGAGGTAGCATTATTTTCTGCTCGTGGGCCGAATATTAGAGACTTTAGCTTTCAGGATGCAGACCTTCTCAAACCAGATATTCTAGCTCCCGGTTCTTTGATATGGGCTGCTTGGTCTCCAAATGGTACAGACGAGCCGAACTATGCTGGAGAGGGATTTGCTATGATTTCTGGAACGAGCATGGCAGCCCCGCACATAGCTGGTATAGCAGCTCTTGTAAAACAGAAGTATCCTAACTGGAGTCCTGCAGCTATCAAATCGGCTTTGATGACGACATCAAAAACGATGGACAGAGGAGGAAGACCTCTTAAGGCACAACAATATTCTGAAACAGAAGCCATGAAACTGGTACCTGCAACACCTTTTGATTATGGGAGTGGTCATGTTAACCCAAGAGCAGCACTGGATCCTGGACTCATCTTTGATGCAGGCTATGAAGACTACTTGGGATTTTTGTGCACGACCGCGGGAATCAACGCTCACGAGATACACAACTACACAAACTCACCTTGCAACTTCACCATGGGCCATCCCTGGAATCTCAACAGCCCATCAATCACCATTGCCCATCTTGTGGGAAGTCAGACTGTTACTCGCACAGTAACAAATGTTGCTGCAGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTATTGCCATAGAAACAAATCCTCCAGCAATGACTTTACTATCCGGTTCATCGAGAAAATTTACAGTAACGCTCACAGCTCGATCACTGACCGGATCATATAGTTTTGGGGAGGTTGTATTGAAGGGCAGTAGGGGACACAAAGTTAGAATACCCGTAGTAGCCATGGGATAA 2295 44.66 MASGPRGQGEIVTSYARHLENKHDMLLGMLFERGSFQKLYSYKHLINGFAVDISHEQAEILRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCSKYKGKCEVDPDTKKDFCNGKIVGAQHFAEAAKAAGAFNPSIHFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPTTTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVMKYSPSDCQRPEVLNKRLVEGKVLLCGYSFGFVVGTASIKRVSQTAKALGAAGFVLAVENISPGTKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGGIGDGLIPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYAGEGFAMISGTSMAAPHIAGIAALVKQKYPNWSPAAIKSALMTTSKTMDRGGRPLKAQQYSETEAMKLVPATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINAHEIHNYTNSPCNFTMGHPWNLNSPSITIAHLVGSQTVTRTVTNVAAEETYTITARMDPAIAIETNPPAMTLLSGSSRKFTVTLTARSLTGSYSFGEVVLKGSRGHKVRIPVVAMG 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 44867837 44876618 + Sed0018477.4 Sed03g2807 708294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g2807 764 Gene3D - 641 763 - -
Sed03g2807 764 SUPERFAMILY Protease propeptides/inhibitors 37 77 - -
Sed03g2807 764 Pfam Fibronectin type-III domain 669 761 IPR041469 -
Sed03g2807 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Sed03g2807 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 8 79 IPR037045 -
Sed03g2807 764 PRINTS Subtilisin serine protease family (S8) signature 183 196 IPR015500 -
Sed03g2807 764 PRINTS Subtilisin serine protease family (S8) signature 104 123 IPR015500 -
Sed03g2807 764 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Sed03g2807 764 CDD PA_subtilisin_like 326 464 - -
Sed03g2807 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 728 IPR045051 -
Sed03g2807 764 SUPERFAMILY Subtilisin-like 79 628 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed03g2807 764 CDD Peptidases_S8_3 80 582 IPR034197 -
Sed03g2807 764 Gene3D Peptidase S8/S53 domain 106 637 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed03g2807 764 FunFam Subtilisin-like protease SBT1.5 106 328 - -
Sed03g2807 764 Pfam Peptidase inhibitor I9 16 77 IPR010259 -
Sed03g2807 764 Gene3D - 319 484 - -
Sed03g2807 764 Pfam Subtilase family 104 585 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed03g2807 764 ProSiteProfiles Serine proteases, subtilase domain profile. 73 624 - -
Sed03g2807 764 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 109 120 IPR023827 -
Sed03g2807 764 Pfam PA domain 348 443 IPR003137 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2807 Sed-Chr3:44867837 Sed11g0573 Sed-Chr11:6269540 0.00E+00 dispersed
Sed03g2806 Sed-Chr3:44867837 Sed03g2807 Sed-Chr3:44867837 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g2807 - - - 0.0