Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g0364 ATGGAAGAAGAAGATCTTCCGGAAGGTAGGGCAGCCCTCAGGCTACTCCGCAGCAGACTCTGCAACCCTAGTTTCTATTTCAAGCCTCCATCCGATTCTTCTGATAACAATTACAGCAAATTGAAGTTTATAATGTCCAGTTCGGTGGTTGAAGCGTGTAATAATTCGATCCTGCTTCTCGGCCCCCGTGGTTCTGGGAAAATGGCGGTGCTGGAACTCGTTCTGCAAGATCTATTACTAGAATATCCCGATATGATCTCCGTAATAAAGTTGAGTGGTCTTTTGCATTGTGATGATAATTGCGCTTTCAAGGAGATTGCTAGGCAGCTTTGCTCAGAGTATCAGTTATTGTTCTCAAAAATGGCATCCTTTGACGACAACTCTCAGTTTATGATAGCTATGCTACGGGAGTGTGGCTTGGCACATAAAACAATTGTTTTTGTACTGGATGAGTTTGATCTATTTGCACAAGGAAAACAACGGTTACTTTATAGTTTGTTAGATGCCATGCAATCAGTGTCATCTCAAGCTGTTGTTATTGGCATCAGTTGTCGATTGGATGCTGATCAGCTACTCGAGAAAAGAGTAAGATCTCGTTTCTCCCATAGAAAGCTGTTATTTCTTCCTCCCTCCAAGGAAGATGTGGAGAGATTGTTGGACCACATTTTATCATTGCCAATAGACTCGGACCTTCCTCGTGACTACGTTATTAAATTTAATGCAAAGCTTCATAAAATTTTAGCAGATGAGAGATTTAAAAAGATTATTAACACTTATTTGGATGCTGATTTGGCCGTCAAACAATTAGTACGATATCTGTTTTGTGCCATATCAAAGATGGACTTGAAATCTGGGTTGCTGACCCTTGAGAATTTTGAACTCGCTCTTTCTAATATTCAGAGGCAGCCCAAGCAGGAGTATATAAAAGATTGTTCCATATTGGAGCTCTATATTCTGGTATGCATGAAAAGGTTGGAAGTTAAGGAGCAGAATTTGTACAACTTCAATTCTGTAATGAAAGAGTACAAGAGTATACATGATTCATTCCGGACATCTGATTATTATTCACCAAGTGTATGCCTAAGGGCTTTTGAGCACCTTCTACAGCGTGAATTAATCGGCTTCGCAGACAACCGTGTACATAATCAATCCGTTGAATTTCGATCAGTCAAGCTGTTGATATCATCTCATGAACTACATCATGGACTGAAGTCGTATCATTCATGTCCTGTCATCCTTCAGAAATTAATGAATTGA 1257 39.94 MEEEDLPEGRAALRLLRSRLCNPSFYFKPPSDSSDNNYSKLKFIMSSSVVEACNNSILLLGPRGSGKMAVLELVLQDLLLEYPDMISVIKLSGLLHCDDNCAFKEIARQLCSEYQLLFSKMASFDDNSQFMIAMLRECGLAHKTIVFVLDEFDLFAQGKQRLLYSLLDAMQSVSSQAVVIGISCRLDADQLLEKRVRSRFSHRKLLFLPPSKEDVERLLDHILSLPIDSDLPRDYVIKFNAKLHKILADERFKKIINTYLDADLAVKQLVRYLFCAISKMDLKSGLLTLENFELALSNIQRQPKQEYIKDCSILELYILVCMKRLEVKEQNLYNFNSVMKEYKSIHDSFRTSDYYSPSVCLRAFEHLLQRELIGFADNRVHNQSVEFRSVKLLISSHELHHGLKSYHSCPVILQKLMN 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2642448 2648315 - Sed0003483.1 Sed04g0364 708967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g0364 418 FunFam Origin of replication complex subunit 4 35 209 - -
Sed04g0364 418 Pfam AAA domain 55 181 IPR049945 GO:0016887(InterPro)
Sed04g0364 418 PIRSF ORC4 3 418 IPR016527 GO:0000808(InterPro)|GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)
Sed04g0364 418 Gene3D - 34 209 IPR027417 -
Sed04g0364 418 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 9 417 IPR016527 GO:0000808(InterPro)|GO:0003677(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Sed04g0364 418 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 219 402 IPR032705 -
Sed04g0364 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 299 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g0364 K02606 - csv:101220845 729.939