Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g0383 ATGGCTAAGCTTTTGCTCACTGTCATCTGGTTTCTGTTTGTAGTAGTACTGGGTTTTTCCAATTGGGTTTATGCTTTTCGCACTTACAATCTCTCTGATTCGTCGCTCTTTGATTCTTATGAAACTTCATTTGCTGTTAATGGTAGTCCTCTCATTGTGGGTCTCACTCTCATTCATGGTGCTGATGCTAAACAAGCAGTCTGTTTGGATGGCACATTGCCTGGATATCACTTGCATCGTGGATATGGGTCAGGAGCTAATAGCTGGCTTATTCAATTGGAGGGAGGCGGATGGTGTAACAGTGTCAGGAATTGTGTCTATCGGAAAACAACCAGGCGTGGATCGTCCAACTTTATGGAGAAGCAGCTACCATTTACAGGAATTCTAAGCAACAGAGCTGAAGAAAATCCCGATTTTTTTAACTGGAACAGAGTGAAGGTCCGTTACTGTGATGGTGCTTCTTTCACTGGAGATTCTGAAGACACGGCTAAACAATTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCTATGGAAGCATTGAAGGCAGAAGGAATGCGATATGCAAATCAGGCCTTGCTTTCAGGCTGCTCCGCTGGAGGGTTGGCATCTATTCTACATTGTGATGAGTTTAGAGGCTTATTTCCAAGAACTACTAAAGTGAAATGTCTGAGTGATGCTGGACTATTCCTTGACGTGGCTGATATATCTGGAGGGCACTATCTTAGGAACTTATTTGGCGGTGTGGTGGGCTTGCAGGGAGCAAAACGAAATCTCCCAGCCGTTTGTACGAACCATCTCGATCCAACTTCGTGTTTCTTCCCACAAAATTCAATTGCTGGAGTCAGTACCCCACTGTTTCTTATCAACGCAGCATACGATTCCTGGCAGATTCAATCTAGTTTAGCCCCACCTTCCCTGGATCCGGCTGGGTATTGGCATGATTGTCGGCTGAACCATGCGAAGTGTAACCAACCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGAATGCTGTTAAGGATTTCTCAAAATCTTCCAAAAATGGATTATTTATTAATTCGTGTTTTGCTCACTGCCAAACTGAGAGACAGGATACTTGGTTCGGCGACAATTCTCCCGTCATCGGAAACAAGCCAATTGCCCTAGCTGTTGGAGACTGGTACTTCGACCGAGCAGCAGTGAAGGCGATCGATTGCCCCTATCCTTGCGACAAGACTTGTCATCATCTGGTTTTTAGAAGCGGTTAG 1257 44.79 MAKLLLTVIWFLFVVVLGFSNWVYAFRTYNLSDSSLFDSYETSFAVNGSPLIVGLTLIHGADAKQAVCLDGTLPGYHLHRGYGSGANSWLIQLEGGGWCNSVRNCVYRKTTRRGSSNFMEKQLPFTGILSNRAEENPDFFNWNRVKVRYCDGASFTGDSEDTAKQLQFRGQRIWLAAMEALKAEGMRYANQALLSGCSAGGLASILHCDEFRGLFPRTTKVKCLSDAGLFLDVADISGGHYLRNLFGGVVGLQGAKRNLPAVCTNHLDPTSCFFPQNSIAGVSTPLFLINAAYDSWQIQSSLAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGFRNQMLNAVKDFSKSSKNGLFINSCFAHCQTERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAIDCPYPCDKTCHHLVFRSG 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2750428 2757059 + Sed0026134.1 Sed04g0383 708986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g0383 418 PANTHER NOTUM-RELATED 28 412 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Sed04g0383 418 Pfam Pectinacetylesterase 51 395 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g3011 Sed-Chr3:46901115 Sed04g0383 Sed-Chr4:2750428 1.20E-123 dispersed
Sed03g3012 Sed-Chr3:46901115 Sed04g0383 Sed-Chr4:2750428 1.60E-81 dispersed
Sed04g0383 Sed-Chr4:2750428 Sed04g0385 Sed-Chr4:2750428 3.50E-184 dispersed
Sed04g0383 Sed-Chr4:2750428 Sed04g0384 Sed-Chr4:2750428 1.20E-200 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g0383 K19882 - csv:101218273 788.875