Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g0384 ATGGCTAAGCTTTTGCTCACTGTCATCTGGTTTCTGTTTGTAGTAGTACTGGGTTTTTCCAATTGGGTTTATGCTTTTCGCACTTACAATCTCTCTGATTCGTCGCTCTTTGATTCTTATGAAACTTCATTTGCTGTTAATGGTAGTCCTCTCATTGTGGGTCTCACTCTCATTCATGGTGCTGATGCTAAACAAGCAGTCTGTTTGGATGGCACATTGCCTGGATATCACTTGCATCGTGGATATGGGTCAGGAGCTAATAGCTGGCTTATTCAATTGGAGGGAGGCGGATGGTGTAACAGTGTCAGGAATTGTGTCTATCGGAAAACAACCAGGCGTGGATCGTCCAACTTTATGGAGAAGCAGCTACCATTTACAGGAATTCTAAGCAACAGAGCTGAAGAAAATCCCGATTTTTTTAACTGGAACAGAGTGAAGGTCCGTTACTGTGATGGTGCTTCTTTCACTGGAGATTCTGAAGACACGGCTAAACAATTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCTATGGAAGCATTGAAGGCAGAAGGAATGCGATATGCAAATCAGGCCTTGCTTTCAGGCTGCTCCGCTGGAGGGTTGGCATCTATTCTACATTGTGATGAGTTTAGAGGCTTATTTCCAAGAACTACTAAAGTGAAATGTCTGAGTGATGCTGGACTATTCCTTGACGTGGCTGATATATCTGGAGGGCACTATCTTAGGAACTTATTTGGCGGTGTGGTGGGCTTGCAGGGAGCAAAACGAAATCTCCCAGCCGTTTGTACGAACCATCTCGATCCAACTTCGTGTTTCTTCCCACAAAATTCAATTGCTGGAGTCAGTACCCCACTGTTTCTTATCAACGCAGCATACGATTCCTGGCAGATTCAATCTAGTTTAGCCCCACCTTCCCTGGATCCGGCTGGGTATTGGCATGATTGTCGGCTGAACCATGCGAAGTGTAACCAACCTCAGATTCAATTTCTTCAAGGTAACTTAATCTATTAA 1014 44.48 MAKLLLTVIWFLFVVVLGFSNWVYAFRTYNLSDSSLFDSYETSFAVNGSPLIVGLTLIHGADAKQAVCLDGTLPGYHLHRGYGSGANSWLIQLEGGGWCNSVRNCVYRKTTRRGSSNFMEKQLPFTGILSNRAEENPDFFNWNRVKVRYCDGASFTGDSEDTAKQLQFRGQRIWLAAMEALKAEGMRYANQALLSGCSAGGLASILHCDEFRGLFPRTTKVKCLSDAGLFLDVADISGGHYLRNLFGGVVGLQGAKRNLPAVCTNHLDPTSCFFPQNSIAGVSTPLFLINAAYDSWQIQSSLAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGNLIY 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2750428 2757059 + Sed0026134.2 Sed04g0384 708987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g0384 337 PANTHER NOTUM-RELATED 28 333 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Sed04g0384 337 Pfam Pectinacetylesterase 51 333 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0384 Sed-Chr4:2750428 Sed07g0937 Sed-Chr7:6851108 3.80E-96 dispersed
Sed04g0383 Sed-Chr4:2750428 Sed04g0384 Sed-Chr4:2750428 1.20E-200 tandem
Sed04g0384 Sed-Chr4:2750428 Sed04g0385 Sed-Chr4:2750428 2.90E-128 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g0384 K19882 - csv:101218273 609.757