Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g0465 ATGGGTTGTGCTGTGAAGTGCGTTTTCATGATTGTTGCCTTCATGTTGATGCCTTTTCTATCTCACAATTCCCACATTTTGATAGCTAACTCATGGTTGAATGAAGCAGACAGCTACAATGTTAAAGAGCTTGAGAGAGTTTCAGGGGAAGATGAGAGTGGAAGAAATGAACCTTTCATTGTGGAGAGAGTTAGAGCTTTACTTGGACTCAAGAGCTTACAATTGGGACATCAAAGCCCATCAGATCTTTCGCTTTCGCCGTCACCGTCGCCGTCGCCATCGCCAGTCGCCACTGCTCCGTCTCCTGCTCCTGTGGCAGCTCATCGAGTGCACATTCATGAACATTCCCACCCTCATCAGCTTCGCCTGCACAAGAGCCGACCAGTTAACAAGCCTAAAAGACAAGATTCAAGAGAAAAAAGAGTCAGAAAAATACTTATTGCAGTTCTTGTGTCTGCAGGATTTACCATTTTCATATGCATTATTGCTGCCTTTTGGGCCTGCAAGAAGCTCAAAAGTAGGAGAGAAGATCCCACAGAGAAGGTCTCGATAAAGAGTGAAACAGGAGAGAAAACTGCTGGATCAAAATCTGGGCTTGATCTGTTCGATCTCAGTATGCTTGGAATGGATGTTGAAGAACAGACTCAATCTTCTGAAAGTGAAAAGGAGTTAGCTGTTCATAAAGAGGGGGAAAGGGGCCAAGAGATGTTGGATTCAGAATTTGATAATGTAAGTGTTTCTTCAAACAAGGAAATTATGTATGTTAATGAGGAAGATGATAGAAAATCAATACAATGTGTATCTGCTAGAGCTGATTCTTCATCTTGGGAGAGAGTGAATCCTGTTAAATCTTGTTCATCAGATGATGTGGAATCATTCCATTCTTGTGGGGATTCCAGTTTGTCTAATGTTCGTCTTTCAAATGCTTCCGAATCTTCTTCGGCCAATGTGATAACAAAGTCTACTTATTCAGTTCCAATTGTGAACTTAACAAGCAAGGAAATACAATGTGATGAACCTAACAAACCATTAACTTCTGATCAGTTGCATCTTACCCTTCCTCGTAATTCAGAACCCAAAATGCAGATGGTTTCACATTCTATAGGTTGCCAAAAGCATGTCCCATCTTTATCGCCGCCTCCGCCTCCGCCTCCACCACCACCGCCACCACCGCTACGGCCATCCCCAGTCGCAGATCGCAATTCATTTTACCTCTCTTCACCCTATTCAACTGGATCTACCTCCTCTTCTGCATTGCTAAGATCATCATCTCCTGCAATGTCAGATTCTTCTTCATTATCTCAAATACCATGGAATGACTTGTCATCACCAACAAATATTGCTAAACCTTCACCACCATCATCTGTTATTCCTCCACCCCCTTGTCCACCACCAAGTTTGAAAGCAAACAATTATTCTTTCAAAACTCCACCCCCTCCTCCATCCAAGCTCCCTCAATTCATGGCATTTGGAAAAGAGGGAAATTCGCGGCCGAAACTTAAGCCTCTCCACTGGGACAAAGTAAGGACTGCACCAGATCAATCAATGGTTTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGATGAAGAAATGATCGAGTCACTATTTGGATACAACCAATATGATTCAATGAAGAATGGTGATGCTAGCAACAAAAGTCCTCCAAGGAAGCATATACTAGAGGCAAAGAGACTTCAGAACCTAACTATACTCTTAAAAGCCTTGAATCTCTCTACAGAACAAGTTTGTGAAGCCATAGAACAAGGGATTGGGTTGCGCTTGAGACAACTTGAAGCACTGGTGAAAATGGTTCCAACCCAGGAAGAAGAGGCCAAATTGTTAAGCTATGAAGGAGACACTGGTGAATTGGGGTATACAGAGAATTTTGTCATAGCAATACTGAGAATACCATTTGCTTTCCAACGAGTAGAAGCCATGCTTTACAAAGAAACTTTTGAAGATGAAGTGAATCATCTCCGAAATTCGTTTTCAATGCTAGAGGAAGCCTGCAAGGAACTAAGATCCAGCAGGCTCTTCCTGAAACTACTCGAAGCAGTACTCAAAACCGGGAACCGAATGAACGTCGGAACAAGCAGAGGAGGCGCAAGAGCGTTCAAACTCGACGCACTCCTAAAACTCTCCGACGTCAAAGGAACCGACGGAAAAACCTCCCTACTCCACTTCGTGGTGCAAGAAATGATCCGATCTGAAGGAATCCGAGTTTCCGGAAGCATAATGGGGAAAATCAGCCAAAAGAACAAATCAAGAACGATCGAAGAAAGAGAAAACGACTACCGAAGAATGGGACTAGATCTGGTCTCCAGTCTCAGCACCGAACTACACAACGTGAAGCGAGCGGCGACGATTGATCTGAAAGTCCTGGCGAGCTCGGCGGCGAATCTGAACGACGGATCGGCGAAACTGCAGCAGCTGGTGGTGAAGGAGCTGTGCGTGGACGAACGGAGCGGGAACTTCGTGAGCGCCATGAAAGGATTCTTGAGCTACGTGAAGAAGACGATGGAGGAGGTGCGGAAGGACGAAGAAGCTGTAATGGCGAGCGTGAGAGAGATCACAGAGTACTTCCATGGAAATCTGAGCAAAGACGAAACGAATCCGCTCAGGATTTTTGTGATCGTGAGAGATTTCTTGGGAATGTTGGACAATGTTTGTAAGAGCTTCAAGATTGGAAGCTGA 2697 44.42 MGCAVKCVFMIVAFMLMPFLSHNSHILIANSWLNEADSYNVKELERVSGEDESGRNEPFIVERVRALLGLKSLQLGHQSPSDLSLSPSPSPSPSPVATAPSPAPVAAHRVHIHEHSHPHQLRLHKSRPVNKPKRQDSREKRVRKILIAVLVSAGFTIFICIIAAFWACKKLKSRREDPTEKVSIKSETGEKTAGSKSGLDLFDLSMLGMDVEEQTQSSESEKELAVHKEGERGQEMLDSEFDNVSVSSNKEIMYVNEEDDRKSIQCVSARADSSSWERVNPVKSCSSDDVESFHSCGDSSLSNVRLSNASESSSANVITKSTYSVPIVNLTSKEIQCDEPNKPLTSDQLHLTLPRNSEPKMQMVSHSIGCQKHVPSLSPPPPPPPPPPPPPLRPSPVADRNSFYLSSPYSTGSTSSSALLRSSSPAMSDSSSLSQIPWNDLSSPTNIAKPSPPSSVIPPPPCPPPSLKANNYSFKTPPPPPSKLPQFMAFGKEGNSRPKLKPLHWDKVRTAPDQSMVWDKLRWSSFELDEEMIESLFGYNQYDSMKNGDASNKSPPRKHILEAKRLQNLTILLKALNLSTEQVCEAIEQGIGLRLRQLEALVKMVPTQEEEAKLLSYEGDTGELGYTENFVIAILRIPFAFQRVEAMLYKETFEDEVNHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEMIRSEGIRVSGSIMGKISQKNKSRTIEERENDYRRMGLDLVSSLSTELHNVKRAATIDLKVLASSAANLNDGSAKLQQLVVKELCVDERSGNFVSAMKGFLSYVKKTMEEVRKDEEAVMASVREITEYFHGNLSKDETNPLRIFVIVRDFLGMLDNVCKSFKIGS 898
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3446046 3450834 - Sed0024959.2 Sed04g0465 709068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g0465 898 MobiDBLite consensus disorder prediction 400 450 - -
Sed04g0465 898 MobiDBLite consensus disorder prediction 78 138 - -
Sed04g0465 898 SUPERFAMILY Formin homology 2 domain (FH2 domain) 503 892 - -
Sed04g0465 898 MobiDBLite consensus disorder prediction 86 100 - -
Sed04g0465 898 MobiDBLite consensus disorder prediction 451 467 - -
Sed04g0465 898 ProSiteProfiles Formin homology-2 (FH2) domain profile. 490 898 IPR015425 -
Sed04g0465 898 MobiDBLite consensus disorder prediction 375 396 - -
Sed04g0465 898 Pfam Formin Homology 2 Domain 492 887 IPR015425 -
Sed04g0465 898 MobiDBLite consensus disorder prediction 371 479 - -
Sed04g0465 898 MobiDBLite consensus disorder prediction 177 197 - -
Sed04g0465 898 Coils Coil 650 670 - -
Sed04g0465 898 PANTHER FORMIN-RELATED 58 894 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Sed04g0465 898 MobiDBLite consensus disorder prediction 112 129 - -
Sed04g0465 898 Gene3D Formin, FH2 domain 487 895 IPR042201 -
Sed04g0465 898 SMART it6_source 490 896 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0465 Sed-Chr4:3446046 Sed06g0275 Sed-Chr6:2340117 1.90E-102 dispersed
Sed04g0464 Sed-Chr4:3446046 Sed04g0465 Sed-Chr4:3446046 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g0465 K28090 - csv:101208374 1253.81