Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed04g0505 | ATGGGAGCAGCATTTCTGATCTCTCTATATTTCTTATTCTTCTACATCATTCACCTATTAATCCGCCATTTTCAGGCTAAGATCCAGAACCGGCCGCCGTCTATTTTCCCAGCCCTGCCGTTTCTCGGCCACCTCCACCGCCTGAAGCCGCCACTCCACCGGACCTTAGCCAAGATCTCCGACGAGCACGGTCCCATTCTCCTACTCCGCTTCGGATCTCGCCCAGTCCTCCTCGTCTCCTCCTCCTCCGCCGCCGACGAATGCTTCTCCACAAACGACGTCGTCTTCGCAAACCGCCCCCGAATCCTCGCCGCCAAACACTTCGGCTACGACTCCACCGTCCTTGTTTGGGCGCCCTACGGCGACCACTGGCGCAATCTCCGCCGCATCTCCGCCCTTCACCTCCTCTCCTCCGCCAATCTCCAATCCCTCTCCTCCGTCCGCGCCGATGAGGTTCGATCCCTAATCCAAACGCTCCGTAAAACCCCTAACCAGATCGTGGATGTTAGAACTGCTCTGTTTGAATTTATGCTTAATGTAATCATGAGGATGATCGCGGGAAAGCGGTATTTCGGCGAGAACGCGGCGGATGCAGAGGAATCTCGGAATTTCAAGGAGATTGTTGCCGAGACGTTTCAATTGTCTCGGGCGAATTTGGTCGATTACTTGCCGATTCTGAAATGGATCGGGATTAGCCGGAAAACGGAGAGGATTTACATGAATCTGCAGAAGAGAAAAGACGAGTTGATTCAGAAGCTAATCGACGAGCATAGAGAGAAGAAAGAAACGATCGAATCTCCATCGAAGAAGAAGAAGTCGATGATCGAAGTAATGTTATCGCTGCAAGAATCAGATCCAGATTACTACACCGACGAAATCATCAAAGGCCATATGATGATTCTGTTATCGGCTGGGACCGACACGTCGTCCGGGACGGTAGAGTGGGCAATGGCGTTACTGCTGAACCATCCCGACATACTGGCAAAAGCAAGAACCGAAATCAATGAAAAAGTAGGCGAAAATCGGCACGTGAAGGAATCGGATTTGGAGGGCCTACCGTATCTGCAGTGTGTAATAAAGGAGACCCTACGGATGTACCCCGTAGGGCCGTTACTTGCGCCCCATGAATCGTCTGCGGATTGTAGGGTAGGTGGGTACCACGTGCCGCGTGGCACCATGTTGTTGGTGAATGCATGGGCTATCCACAACGACCCTGGCGTTTGGGAGGAGGCCGGAGTGTTTAAGCCGGAGCGATTCGAGGCGCCAGCGGAGGGCGGAGACGGGTTGAGGTACATGCCGTTTGGGGCGGGGAGGAGGGGGTGCCCTGGGGAAGGGCTGGCGATGAAAATGGTGGGGTTGGTTTTGGGGTCGTTGATTCAGTGCTTTGAGTGGGAGAGAATTGGGGAAGAAATGGTGGACATGGGTGAAGGGACTGGGTTGTCCATGCCCAGGGCTGTCCCTTTGCAAGCTAAGTTCTAG | 1479 | 53.68 | MGAAFLISLYFLFFYIIHLLIRHFQAKIQNRPPSIFPALPFLGHLHRLKPPLHRTLAKISDEHGPILLLRFGSRPVLLVSSSSAADECFSTNDVVFANRPRILAAKHFGYDSTVLVWAPYGDHWRNLRRISALHLLSSANLQSLSSVRADEVRSLIQTLRKTPNQIVDVRTALFEFMLNVIMRMIAGKRYFGENAADAEESRNFKEIVAETFQLSRANLVDYLPILKWIGISRKTERIYMNLQKRKDELIQKLIDEHREKKETIESPSKKKKSMIEVMLSLQESDPDYYTDEIIKGHMMILLSAGTDTSSGTVEWAMALLLNHPDILAKARTEINEKVGENRHVKESDLEGLPYLQCVIKETLRMYPVGPLLAPHESSADCRVGGYHVPRGTMLLVNAWAIHNDPGVWEEAGVFKPERFEAPAEGGDGLRYMPFGAGRRGCPGEGLAMKMVGLVLGSLIQCFEWERIGEEMVDMGEGTGLSMPRAVPLQAKF | 492 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3777152 | 3779023 | - | Sed0014261.1 | Sed04g0505 | 709108 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed04g0505 | 492 | PANTHER | CYTOCHROME P450 82C3-RELATED | 12 | 491 | IPR050651 | - | |
Sed04g0505 | 492 | PRINTS | P450 superfamily signature | 441 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | PRINTS | P450 superfamily signature | 357 | 368 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | PRINTS | P450 superfamily signature | 432 | 441 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | Pfam | Cytochrome P450 | 33 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | Gene3D | Cytochrome P450 | 25 | 492 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | CDD | CYP81 | 64 | 488 | - | - | |
Sed04g0505 | 492 | SUPERFAMILY | Cytochrome P450 | 32 | 492 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | PRINTS | E-class P450 group I signature | 176 | 194 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | PRINTS | E-class P450 group I signature | 431 | 441 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | PRINTS | E-class P450 group I signature | 397 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | PRINTS | E-class P450 group I signature | 441 | 464 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | PRINTS | E-class P450 group I signature | 356 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0505 | 492 | Coils | Coil | 232 | 259 | - | - | |
Sed04g0505 | 492 | FunFam | Cytochrome P450 family protein | 23 | 492 | - | - | |
Sed04g0505 | 492 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 434 | 443 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g0505 | Sed-Chr4:3777152 | Sed13g1793 | Sed-Chr13:22975412 | 1.10E-144 | dispersed | |
Sed04g0504 | Sed-Chr4:3750180 | Sed04g0505 | Sed-Chr4:3777152 | 9.90E-224 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed04g0505 | - | - | - | 0.0 |