Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed04g0569 | ATGCAAAGCATTTTCACGTGGGTTCTTCTAATCTTGTTGTCTTCTTTACTTATAATATGGAAGAAGAAAGTTGCCATACACAACAACAAACTTTATCCTCCGGGCCCTCCTAAGCTTCCTCTTTTGGGTCATTTGCACCTCATTGGCTCTCTCCCCCATCGCTCTTTTTCTAAGCTTTCTAAAAAATATGGCCCCGTCATGCTCCTCAAACTCGGCTCCGTTCCAACCATCGTAATCTCTTCCGCCGCTGCTGCAAAAGAGGTGTTAAAAGTTCACGACCTAGCTTCTTGCAGCCGACCTCCCTCGGCCCCTTATCACCTTATGGAGATTATTGGAGGGAAGTTCGGAAGATTTGTGTGCTTGAACTCTTTAGTGCTCACAAAAGTGCAGTCGTTTCAGCCGATAAAAGAAGAAGAGATGAGCTTGTTGTTAAAGTCCATCTCGGAATCTTCATGTTCTGCCACGCTTGTTGACTTGAGTGAGAAATCGTATTCTCTTACTGCAAATATAATAACTCGAATTGCTTTTGGCAAGAGCTTTAGAGGCAGTGACTTAGATAATGAAAATTTTCAAAAGGTTATTCGTAGAGCAATGGCAGCATTGGGAAGCTTTTCCTTTATTGACTTCTTTCCCAATGTGGGTTGGATTATTGATCGAATAAGTGGTGTTCATATGAGATTGGAAAAAAGTTTTGAAGAGTTGGATGGGTTTTTCCAACAAGTAGTGGATGATCGCATTAAATTTGGAGATACTTCATTAAGTGATGATCAAGAAAACATAGTTGATATTTTGTTGAAACTGGAAAGAGATCGCTCTGAGATTGATGCAGTAAAATTTACTAGAGATTGCATTAAAGCACTCATCATGGACATATTCTTAGCCGGGGTGGAAACAACAGCAAACACCATTGTTTGGGCCATGACAGAACTGGTTAGGAACCCAAGGGTGATGAAGAAGGTTCAAGACGAGATCAGAAGTAGCATAAAAGAAGAACAAGCGAAAGAGACCGACCTCGAAAAGCTTCACTACCTAAAAATGGTAGTGAAAGAAGTCTTAAGGTTGCATACACCCGCCCCACTTCTAGTCCCAAGAGAAACCATGTCAAACTTTAAGCTCAATGGTTATGATGTTGATCCCAAAACTCATCTTCATGTTAATGTATGGGCGATCGGACGAGATCCAGAGTTGTGGCAAAATCCAGAAAAGTTCTTCCCAGAGAGATTTATTGAAAATAACATCGATTACAAAGGACAGAATTTTGAGTTCTTACCGTTCGGATCTGGTCGAAGAATCTGTCCCGGAATGAATATGGGAACCGTTACGGTCGAGTTAGCGCTGGCTAACTTGTTGTTGTGTTTTAATTGGAAATTACCAAATGGGATTAAAGAAGAAAATGTGGATATAAAAGAGGACGCTGGTCTTGCAATTGCCAAGAAGTCACCCTTACAACTTGTTCCTGTCCCTTACTTCAATTCCAATTAA | 1482 | 40.89 | MQSIFTWVLLILLSSLLIIWKKKVAIHNNKLYPPGPPKLPLLGHLHLIGSLPHRSFSKLSKKYGPVMLLKLGSVPTIVISSAAAAKEVLKVHDLASCSRPPSAPYHLMEIIGGKFGRFVCLNSLVLTKVQSFQPIKEEEMSLLLKSISESSCSATLVDLSEKSYSLTANIITRIAFGKSFRGSDLDNENFQKVIRRAMAALGSFSFIDFFPNVGWIIDRISGVHMRLEKSFEELDGFFQQVVDDRIKFGDTSLSDDQENIVDILLKLERDRSEIDAVKFTRDCIKALIMDIFLAGVETTANTIVWAMTELVRNPRVMKKVQDEIRSSIKEEQAKETDLEKLHYLKMVVKEVLRLHTPAPLLVPRETMSNFKLNGYDVDPKTHLHVNVWAIGRDPELWQNPEKFFPERFIENNIDYKGQNFEFLPFGSGRRICPGMNMGTVTVELALANLLLCFNWKLPNGIKEENVDIKEDAGLAIAKKSPLQLVPVPYFNSN | 493 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 4331800 | 4334141 | + | Sed0013388.1 | Sed04g0569 | 709172 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed04g0569 | 493 | PRINTS | P450 superfamily signature | 423 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0569 | 493 | PRINTS | P450 superfamily signature | 294 | 311 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0569 | 493 | PRINTS | P450 superfamily signature | 346 | 357 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0569 | 493 | FunFam | Cytochrome P450 83B1 | 19 | 485 | - | - | |
Sed04g0569 | 493 | Pfam | Cytochrome P450 | 33 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0569 | 493 | Gene3D | Cytochrome P450 | 18 | 485 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0569 | 493 | CDD | CYP71-like | 62 | 482 | - | - | |
Sed04g0569 | 493 | PANTHER | CYTOCHROME P450 71B11-RELATED | 8 | 487 | IPR050193 | - | |
Sed04g0569 | 493 | SUPERFAMILY | Cytochrome P450 | 33 | 488 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0569 | 493 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 425 | 434 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Sed04g0569 | 493 | PRINTS | E-class P450 group I signature | 422 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0569 | 493 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0569 | 493 | PRINTS | E-class P450 group I signature | 283 | 300 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0569 | 493 | PRINTS | E-class P450 group I signature | 345 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0569 | 493 | PRINTS | E-class P450 group I signature | 303 | 329 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0569 | 493 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0569 | 493 | PRINTS | E-class P450 group I signature | 166 | 184 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0569 | 493 | PRINTS | E-class P450 group I signature | 386 | 410 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed04g0569 | 493 | PRINTS | E-class P450 group I signature | 432 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g0564 | Sed-Chr4:4287024 | Sed04g0569 | Sed-Chr4:4331800 | 2.80E-249 | dispersed | |
Sed04g0569 | Sed-Chr4:4331800 | Sed04g0573 | Sed-Chr4:4372009 | 3.60E-180 | dispersed | |
Sed13g1868 | Sed-Chr13:23704576 | Sed04g0569 | Sed-Chr4:4331800 | 4.70E-22 | dispersed | |
Sed13g1869 | Sed-Chr13:23704576 | Sed04g0569 | Sed-Chr4:4331800 | 1.80E-31 | dispersed | |
Sed04g0568 | Sed-Chr4:4319134 | Sed04g0569 | Sed-Chr4:4331800 | 5.50E-184 | tandem | |
Sed04g0569 | Sed-Chr4:4331800 | Sed04g0570 | Sed-Chr4:4343711 | 4.10E-168 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed04g0569 | - | - | - | 0.0 |