Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g0573 ATGGTTTGCCTTATTGAGATGACAAACAGCACTTTACTTTGGATTCCTATAATCCTCTTGTTATCTTCCTTATTACTTCTCAAAACCAAAAAGCTTCTTCACAACAACAAAAACACCATCCTTGTTCCTCCAAGCCCTCCAAAGCTTCCTCTCTTGGGTCATTTACATCTCCTTTGCTCCCTCCCCCATCGCTCGCTATGGGAACTTTCGAAAAAACACGGCCCCGTCATGCTTCTCAAACTCGGCTCGGTCCCAACCGTCGTCGTCTCCTCTGCTGCCGCCGCAAAAGAAATGTTCAAACTCCACGACCTCGCTTCTTGCAGCCGCCCTCGCCTAGCCGCCATCAGAAGATTCACGTACAACTTTCAGGACCTAAACTTGTCCCCATACAGCGATCGCTGGAGGGAGCTTCGAAAGATTTGCATCGTCGAGCTCTTCAGCACAAAGCGAGTGCAGTCGTTTCAGCATATTAGAGAAGAGGAAGTGAGTCAGTTGATAAACTCCATCTCTCAATCTTGTGGAACTCCGATTGATCTGAGCAAGATATCGTACTCTTTCATGGCGAACGTGACTTTTCGAGTTGCTTTTGGGAAGATCTTTAGCGGGGGTGAGCTGGATAACGAGGATTTTAAACTGATTATTCATAGATCGATGGTGGCATTGGGAAGCTTCTCGGCGACAGACTTCTTTCCGGGTATCGGTTGGATTATTGATCGGATCAGTGGTGTTCATGGGAGGTTGGAGAAGAGTTTTGCGGAGTTGGATGCTTTTTTTCAACAGGTGGTTGATGATCGCATCAACTTTAAGGCAGGTTCTAGGGATGAAGAAAATATTGTTGATGTTTTGTTGAGGTTGGGGAGAGAAAGCTCCAAATTTGATGTCGTACAATTTACTCAAGATTGCGTTAAGGCACTTATCATGGACATATTTCTAGCTGGAGTAGAAACAGGTGAAAACACCTTAGTTTGGACAATGACAGAGCTCATAAAGAATCCAAAAGTAATGAAAAAATTACAAGACGAGATCAGATGCGCCGTAAAAGGAGACATAGTGAAGGAGAGTGACCTTGAAAAGCTTCCATATTTAAAAATGGTACTCAAAGAGGTTCTAAGGCTTCACCCGCCGGTCGCGCTTCTCCTTCCAAGAGAAACCACGTCCCATTTCAAAATAAACGGCTATGATATCGACCCCAAATCCCTTCTTCATGTTAATGTATGGGCGATCGGACGAGACCCAGAATCTTGGACGAACCCAGAAGAGTTCTTCCCAGAGAGATTTATCGAGAGCGATATCGATTACAAAGGACAAGATTTTGAGTTGATTCCATTCGGAGCGGGTCGAAGAATCTGTCCGGGGATGAATATGGGGATGGTTAGTGTGGAGCTGGCGTTGGCTAATATGATGTTGTGCTTTGATTGGAAACTACCAAATGGAATGAAAGAAGAAAATGTGGACATGGAAGAGGATGCTGGTCTCTCAGTTTCCAAGAAATCTCCTCTTCAGCTTGTTCCAGTCCCATACTTCACCTTTAGTTGA 1536 44.79 MVCLIEMTNSTLLWIPIILLLSSLLLLKTKKLLHNNKNTILVPPSPPKLPLLGHLHLLCSLPHRSLWELSKKHGPVMLLKLGSVPTVVVSSAAAAKEMFKLHDLASCSRPRLAAIRRFTYNFQDLNLSPYSDRWRELRKICIVELFSTKRVQSFQHIREEEVSQLINSISQSCGTPIDLSKISYSFMANVTFRVAFGKIFSGGELDNEDFKLIIHRSMVALGSFSATDFFPGIGWIIDRISGVHGRLEKSFAELDAFFQQVVDDRINFKAGSRDEENIVDVLLRLGRESSKFDVVQFTQDCVKALIMDIFLAGVETGENTLVWTMTELIKNPKVMKKLQDEIRCAVKGDIVKESDLEKLPYLKMVLKEVLRLHPPVALLLPRETTSHFKINGYDIDPKSLLHVNVWAIGRDPESWTNPEEFFPERFIESDIDYKGQDFELIPFGAGRRICPGMNMGMVSVELALANMMLCFDWKLPNGMKEENVDMEEDAGLSVSKKSPLQLVPVPYFTFS 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4372009 4374955 + Sed0019039.1 Sed04g0573 709176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g0573 511 Pfam Cytochrome P450 43 494 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 FunFam Cytochrome P450 83B1 28 503 - -
Sed04g0573 511 CDD CYP71-like 72 500 - -
Sed04g0573 511 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 Gene3D Cytochrome P450 36 505 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed04g0573 511 SUPERFAMILY Cytochrome P450 43 506 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g0573 511 PANTHER CYTOCHROME P450 71B11-RELATED 21 505 IPR050193 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0567 Sed-Chr4:4311867 Sed04g0573 Sed-Chr4:4372009 1.50E-98 dispersed
Sed04g0568 Sed-Chr4:4319134 Sed04g0573 Sed-Chr4:4372009 6.10E-199 dispersed
Sed04g0569 Sed-Chr4:4331800 Sed04g0573 Sed-Chr4:4372009 3.60E-180 dispersed
Sed04g0570 Sed-Chr4:4343711 Sed04g0573 Sed-Chr4:4372009 5.20E-167 dispersed
Sed04g0571 Sed-Chr4:4358185 Sed04g0573 Sed-Chr4:4372009 4.20E-65 dispersed
Sed04g0573 Sed-Chr4:4372009 Sed06g1701 Sed-Chr6:41719719 8.90E-190 dispersed
Sed04g0572 Sed-Chr4:4363078 Sed04g0573 Sed-Chr4:4372009 2.60E-83 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g0573 - - - 0.0