Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g0647 ATGGGAGATTTTAAGAGTAAATTTTTATGGGGTGTTGTTCCATTTTTGGCTATGGTGAGCTTGGAGGGTTGCACCATTGCATTAACTATTTTGGCAAAAACAGCAATTACTTATGGAATGAGCACTTTTGTTTTTGTTGTCTACACAAACACTGTTGCTTCCATTATTCTTATTCCTTATTCATTCTTCTTTCACTATAATGACAGAAAGGAATATCAGCAGTCTTTGTTTTCCTTTCCTCTTCTCCTCCGAATCTTCCTCTTGGGTTTCCTAGGGATATGTGTGTCTCAGAACCTTGCCTTTTTGGGCCTAAGCTACAGCTCTCCAATTGTTGTATGTGCAATGGGTCTTATGCTGCCAGCCATTTCTTTCATACTTTCCATCCTTATCAGGAGGACAAAAATGGACTGGACAAGTCCCAGTTTCATAACAAAAGTAGTTGGAACAGTTATTTCTGTTATAGCAGCTACTTCTGAAGAGCTTTACCTAGGCCCAGTTGTACGGAAAAATCCATCTCCTCATTTACATTTACAATTCAAACAAAAGCTTTTGGTCTTTACTTCAACAACAGATTGCTGGATTTTGGGTGGCCTTTTTCTAGCGGCTGCTACTTTATGTGTCTCAATATGGAACATTATTCAGTTGGGAGTCGTGAAACAATACTCGCAAGTGATGAAAGTTGCCTCCTTTTATAGTTTGGTCGGCACGGTACTCTCTGCGACCATGGCTTTCTTCTTCGTCGGCGACTCGAGTGCGTGGAGAATCGGATCGAACTTGGACCTCTCTCTCATTATCACAACGGGGATATTTAGCGGTTTGATTAGGAACCGAGTGCAAATGTGGTGCATGAAAGTGAAAGGGCCATATTACGTGCCCATGTTCAAGCCTTTTGGCATTCTTTTTGCAACTTTCTTCGGCTCCACCTATTTTGGAGACACTTTCCACTATGGAAGTGCAATGGCAGCATTTATAGCAGGAATGGGATATTTGACAGTAATTTGGGGGCAAATGAAAGAAGATAAAGGAATAGGACAAGACAAAGTTGACGACAGCAATAATGATGATAATAATTTGTCTTCAGCCAAACTTCCATTTCTGGACGAAGAATCAAAAGTGTAA 1119 40.57 MGDFKSKFLWGVVPFLAMVSLEGCTIALTILAKTAITYGMSTFVFVVYTNTVASIILIPYSFFFHYNDRKEYQQSLFSFPLLLRIFLLGFLGICVSQNLAFLGLSYSSPIVVCAMGLMLPAISFILSILIRRTKMDWTSPSFITKVVGTVISVIAATSEELYLGPVVRKNPSPHLHLQFKQKLLVFTSTTDCWILGGLFLAAATLCVSIWNIIQLGVVKQYSQVMKVASFYSLVGTVLSATMAFFFVGDSSAWRIGSNLDLSLIITTGIFSGLIRNRVQMWCMKVKGPYYVPMFKPFGILFATFFGSTYFGDTFHYGSAMAAFIAGMGYLTVIWGQMKEDKGIGQDKVDDSNNDDNNLSSAKLPFLDEESKV 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5083563 5086763 + Sed0021587.1 Sed04g0647 709250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g0647 372 MobiDBLite consensus disorder prediction 344 372 - -
Sed04g0647 372 Pfam EamA-like transporter family 26 151 IPR000620 GO:0016020(InterPro)
Sed04g0647 372 PANTHER WAT1-RELATED PROTEIN 16 351 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0647 Sed-Chr4:5083563 Sed11g1944 Sed-Chr11:33783997 1.10E-43 dispersed
Sed03g0149 Sed-Chr3:930140 Sed04g0647 Sed-Chr4:5083563 1.00E-40 wgd
Sed04g0647 Sed-Chr4:5083563 Sed06g1618 Sed-Chr6:40932439 8.50E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g0647 - - - 0.0