Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g0795 ATGGCGGACCATTCTTCCGATCGCGAAATCGATTCAGGCTTCAACCATGGCTCGCCGCAACAACGTCTCTACAATCCCTACAAGGATCTCGAGCTTCCTTATCGGAACTTCCAGCTTTCAACCTCCCCCGAGTTTCTCTTCGACGAAGAAGCTCGCCGCCAGCGCCGATCTTGGGGCGAGAATCTCACCTTCTACACCGGTTGCGGTTACCTCGCCGGTGCAGTCGGCGGCGCGTCCACCGGCTTCGTTTCCGGCGTCAAATCTTTCGAATCAGGCGATACTATGAAGCTCCGGATCAATCGGATCCTAAACTCTTCCGGCCATTCAGGGCGGCTCTGGGGGAACCGCCTCGGCGTGATCGGGTTGCTGTATGCTGGTTTGGAGAGCGGGGTTGAGGCTGTGAGGGATACGGACGATGTGTGGAACTGCGTTGCGGCTGGACTTGGCACCGGCGCGCTTTATCGTGCGGCGGGAGGGGTGAGATCGGCGGCGGTGGCCGGTGCTGTCGGCGGCGTTGTGGTTGGACTGGCGGTGACGGGTAAGCAGATTTTGAAGCGGGCTATGAATGGGAAACATATGCTCTGA 585 58.97 MADHSSDREIDSGFNHGSPQQRLYNPYKDLELPYRNFQLSTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGASTGFVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGVEAVRDTDDVWNCVAAGLGTGALYRAAGGVRSAAVAGAVGGVVVGLAVTGKQILKRAMNGKHML 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6637170 6638802 + Sed0009384.1 Sed04g0795 709398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g0795 194 Pfam Tim17/Tim22/Tim23/Pmp24 family 63 173 - -
Sed04g0795 194 MobiDBLite consensus disorder prediction 1 22 - -
Sed04g0795 194 PANTHER TIM23 37 176 IPR045238 GO:0005744(PANTHER)|GO:0008320(PANTHER)|GO:0022857(InterPro)|GO:0030150(PANTHER)|GO:0031305(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0795 Sed-Chr4:6637170 Sed06g0682 Sed-Chr6:6474295 8.90E-50 dispersed
Sed04g0795 Sed-Chr4:6637170 Sed09g1672 Sed-Chr9:40110053 1.40E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g0795 K17794 - csv:101221925 316.235