Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g0822 ATGGAAGAAAGTAGAAATCAGCCGTGTGAGCAAAGTACAAAGGGGGTTGCTAAAACTAAGAGCAGGAAGGATCAGAACCTCAATGTGTATGTGTGGGACATGGATGAGACGATCATCCTCCTAACGTCTCTGTTGAATGGCACATATGCTGAGGCTTTTTGTGGTTCAAAGGATGTTAAAAGGGGTGAAGAACTGGGCAAAATTTGGGAGAAGCAGATTCTTGATCTGTGTGATCGTCACTTCTTCTATGATCAAATAGAGAACTATAATCAGCCCTTTCTTGATGCATTGATTGCATATGATGATGGCCGTGATCTTTCTAATTATGATTTTGACCAAGATGGTTTTGGTCCACCAAATGATGATGGAAACAAAAGAAAACTGGCTTTTAGGCAACGTGCTATCGCCACTAAGTACAGCGAGGGCCTGCGGAATATCTTTAGCCAACGGAAGATGAAGCTCTGGGAAGAATTATATGAAATGACGGATGTTTATACAGATAGATGGTTATCCTCAGCTCGAGCTTTCTTGGAAGAGTGTTCGTTTTCAGATAAAGCACCACGGGCCTCTGCTGATCGGACATCTAACACTTTTTCTAGAAGTGAGCATGTTAATGTCTTGGTGACTTCTGGATCATTGATACCCAGCCTTGTGAAATGCTTACTATTTCGGCTTGATAATTTAATATCTCCTGGAAATGTCTACAGTTCGTGGGAAGTGGGAAAACTGCAATGCTTTAAGTGGATCAAGGAGCGTTTTAACAAGTCGAACATTCGTTTTTGCGTAATAGGAAATGGATGGGAAGAGTGTGAAGCTGCACAGTCCATGAAATGGCCATTTGTTAAGATTGATATGCAACCTGAAAGTCGTCACAGGTTTCCTGGTCTGTCTTTGAAAACACTGGGCTTTTACTTCTCTGTTATTTATGGTAAATCCGACTCATCAAGCGATGAAGAATAG 960 41.46 MEESRNQPCEQSTKGVAKTKSRKDQNLNVYVWDMDETIILLTSLLNGTYAEAFCGSKDVKRGEELGKIWEKQILDLCDRHFFYDQIENYNQPFLDALIAYDDGRDLSNYDFDQDGFGPPNDDGNKRKLAFRQRAIATKYSEGLRNIFSQRKMKLWEELYEMTDVYTDRWLSSARAFLEECSFSDKAPRASADRTSNTFSRSEHVNVLVTSGSLIPSLVKCLLFRLDNLISPGNVYSSWEVGKLQCFKWIKERFNKSNIRFCVIGNGWEECEAAQSMKWPFVKIDMQPESRHRFPGLSLKTLGFYFSVIYGKSDSSSDEE 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6883790 6887755 + Sed0020644.2 Sed04g0822 709425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g0822 319 FunFam Eyes absent homolog 28 293 - -
Sed04g0822 319 Gene3D - 28 293 IPR038102 -
Sed04g0822 319 NCBIfam EYA conserved domain 28 301 IPR006545 GO:0007275(InterPro)
Sed04g0822 319 PANTHER EYES ABSENT 11 307 IPR028472 GO:0004725(InterPro)|GO:0004725(PANTHER)|GO:0005634(PANTHER)|GO:0030154(PANTHER)|GO:0045739(PANTHER)|GO:0048856(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0821 Sed-Chr4:6883549 Sed04g0822 Sed-Chr4:6883790 1.40E-188 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g0822 K15616 - csv:101203755 518.85