Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g0956 ATGGGCGAAGAGGGACGATCCTTGGCCGTAACCCCCACATGGGCTTTCGCAACGGTGGTCACTCTCATGGTTTGTCTTGGATTCTTCTTCCAGGGCACTTTGAATCGAACCAAAAAGTGGTTGAATAGGACGAAGAGGAAATCGTTGCTCGCTGCGTTGGAGAAGATTAAAGAAGAGCTGATGCTTTTTGGACTTCTGTCGTTGTTGATGGGTCATTGGATTGTTTTTGTCGCAAGAATTTGTGTGAAGTCGTCGCTCTTGAGCAGCCGTTTCTATCCTTGTGCGTTGGATACTGATCTGAAACGAGTTCGAGACATTTCTATTGCGAGTGAAAACATGAACAGTTCTTTTCCAAGGGAGCATAGTAAATCTGGGATTCGAGAGTATTGTCCTGAGGGTCGAGAATCATTTGCTTCATATGAAAGTTTAGAGCAGCTTCATCGATTAATATTCGTTCTCGGCATCACCCATGTTTCTTATAGTTTCATTGCCATTGCCCTGGCTATGATTAAGATATATGGCTGGCGAACATGGGAAAATGAGGCCAGGGCCTTGGCCACTCAGAACGCACAAGAAGAATCTGTACAAGCGTCATCAACTGGACCAAAAATAAGGCGACTATCGACTTTTGTCTTTCACCATACCTCTCATCCATGGAGTCAGCATAGAGTCCTTGTCTGGCTGCTCTGTTTCAGCCGCCAGTTTTGGAGTTCTATCAATCGTGCTGATTACATGGCTTTGCGGTTGGGCTTCATCAGTACCCACCAACTCCATATATCTTACGACTTCCATAATTATATGCTTCGAAGCATGGAGGATGAATTTCGCGATATGGTTGGCATAAGTGTGCCACTCTGGATATATGCCATTGCCTGTATCTTCCTTAACTTCCACGGAAGCAACATTTACTTCTGGCTTTCCTTCCTCCCAGCCATTTTGGTTCTGCTGATCGGGACGAAACTGCACCGGGTAGTGGTAAAGTTGGCTGTAGAAGTTGTGGATGAATCTTCAAGGGGATATTATTGTTTTAACTTAAGGGATGAATTGTTTTGGTTTGGGAAGCCTAAGCTTCTTTTATGGTTGATACAATTTATATCCTTCCAGAATGCTTTTGAGATGGCTACATTTATTTGGTCCCTGGTAAGTTTTCAATGA 1155 43.98 MGEEGRSLAVTPTWAFATVVTLMVCLGFFFQGTLNRTKKWLNRTKRKSLLAALEKIKEELMLFGLLSLLMGHWIVFVARICVKSSLLSSRFYPCALDTDLKRVRDISIASENMNSSFPREHSKSGIREYCPEGRESFASYESLEQLHRLIFVLGITHVSYSFIAIALAMIKIYGWRTWENEARALATQNAQEESVQASSTGPKIRRLSTFVFHHTSHPWSQHRVLVWLLCFSRQFWSSINRADYMALRLGFISTHQLHISYDFHNYMLRSMEDEFRDMVGISVPLWIYAIACIFLNFHGSNIYFWLSFLPAILVLLIGTKLHRVVVKLAVEVVDESSRGYYCFNLRDELFWFGKPKLLLWLIQFISFQNAFEMATFIWSLVSFQ 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11092018 11097071 + Sed0022273.2 Sed04g0956 709559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g0956 384 PANTHER MLO-LIKE PROTEIN 1 2 383 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed04g0956 384 Pfam Mlo family 5 383 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0956 Sed-Chr4:11092018 Sed04g1597 Sed-Chr4:30737466 1.30E-113 dispersed
Sed04g0955 Sed-Chr4:11092018 Sed04g0956 Sed-Chr4:11092018 7.80E-221 tandem
Sed04g0956 Sed-Chr4:11092018 Sed04g0957 Sed-Chr4:11092018 1.60E-220 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g0956 K08472 - csv:101217051 698.738