Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed04g0982 | ATGTTATCAAGTTTGATGAACTTCCTGAGGGCCTGCTGGCAGCCATGTGCTGATCGCTGGTCAGGTCGGGGCAGTAGTTCCGATTCGGTTGGCTGCCAAGAAGGGCTACTTTGGTACAAGGACCATGGCCACCACATCAACGGAGAGTTTTCAATGGCTGTTGTTCAGGCCAACAATTTGCTTGAGGATCAGAGCCAGCTTGAGTCTGGCCCCTTGGGCTTGCTTGAGACTGGACCCTATGGAACCTTTGTAGGAATATACGATGGCCATGGTGGCCCCGAGACCTCGCGATTCATATGTGGTAACTTGTTCCAGCACCTCAAAGTGTTTGCCACAGAAGAAAAAGCAATGTCAGTAAATGTAATAAAGAAAGCATTCCAAGCAACAGAAGAGGGGTTTCTCTCCATTGTCACCAAGCAATGGCCTATAAACCCCCAGATTGCGTCGGTTGGTTCTTGCTGTCTGGTCGGTGTGATTTGTAATGGGAAACTCTACATTGCGAATCTTGGTGATTCCCGAGCTGTGTTGGGAAGGCTTGTTCGTTCAACTGGGGAAGTTCTTCCCATTCAACTATCATCAGAGCACAATGTAAGCATAGAATCAGTTCGCCAGGAGATGCAGTCTTTGCACCCTGATGACCCCCAGATAGTAGTGTTGAAGCATAATGTATGGCGCGTAAAGGGATTGATTCAGATTTCTCGGTCAATTGGAGACGAATATCTCAAAAAGCAAGAGTTTAACCGGGCACCTTTGTATGCTAGGTTTCGTCTCCGACAACCCTTCAGTAGGCCTATTTTGAGCTCAGAACCTGCAATCTCTGTGCACGAACTCAATCCGGACGACCAATTCCTCATATTTGCTTCTGATGGGTTGTGGGAGCACCTTAGCAACCAGGATGCAGTTGATATCGTTCACAAGCATCCTCACAGTGGAAGTGCAAGGAGGTTGGTGAAAGCAGCAATGCAGGAAGCAGCTAAGAAACGAGAAATGCGATACTCCGACTTGAAGAAGATCGACCGTGGGGTTAGGCGACATTTCCACGACGACACGACAGTGATAGTCGTGTTTCTGGGGTCGAGCAAAGGGAGCAGTGACACAGGGGGAAGGAGCCCTGTTGTGTCAGTGAAAGGGGGAGGAGTGAACCTATCTGCAAAGTCTCTAGCACACTCAGAGCTCAACACTGCCCCTCCATGA | 1194 | 49.08 | MLSSLMNFLRACWQPCADRWSGRGSSSDSVGCQEGLLWYKDHGHHINGEFSMAVVQANNLLEDQSQLESGPLGLLETGPYGTFVGIYDGHGGPETSRFICGNLFQHLKVFATEEKAMSVNVIKKAFQATEEGFLSIVTKQWPINPQIASVGSCCLVGVICNGKLYIANLGDSRAVLGRLVRSTGEVLPIQLSSEHNVSIESVRQEMQSLHPDDPQIVVLKHNVWRVKGLIQISRSIGDEYLKKQEFNRAPLYARFRLRQPFSRPILSSEPAISVHELNPDDQFLIFASDGLWEHLSNQDAVDIVHKHPHSGSARRLVKAAMQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVVFLGSSKGSSDTGGRSPVVSVKGGGVNLSAKSLAHSELNTAPP | 397 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 11371063 | 11375015 | + | Sed0011975.2 | Sed04g0982 | 709585 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed04g0982 | 397 | FunFam | Phosphatase 2C family protein | 38 | 366 | - | - | |
Sed04g0982 | 397 | Gene3D | - | 38 | 364 | IPR036457 | - | |
Sed04g0982 | 397 | CDD | PP2Cc | 81 | 357 | IPR001932 | - | |
Sed04g0982 | 397 | ProSitePatterns | PPM-type phosphatase domain signature. | 83 | 91 | IPR000222 | GO:0043169(InterPro) | |
Sed04g0982 | 397 | SUPERFAMILY | PP2C-like | 78 | 358 | IPR036457 | - | |
Sed04g0982 | 397 | SMART | PP2C_4 | 41 | 355 | IPR001932 | - | |
Sed04g0982 | 397 | PANTHER | PROTEIN PHOSPHATASE | 42 | 356 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Sed04g0982 | 397 | Pfam | Protein phosphatase 2C | 83 | 326 | IPR001932 | - | |
Sed04g0982 | 397 | ProSiteProfiles | PPM-type phosphatase domain profile. | 64 | 357 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g0978 | Sed-Chr4:11370158 | Sed04g0982 | Sed-Chr4:11371063 | 2.10E-231 | dispersed | |
Sed04g0979 | Sed-Chr4:11370158 | Sed04g0982 | Sed-Chr4:11371063 | 2.10E-231 | dispersed | |
Sed04g0982 | Sed-Chr4:11371063 | Sed04g0984 | Sed-Chr4:11371063 | 1.10E-182 | dispersed | |
Sed04g0981 | Sed-Chr4:11370158 | Sed04g0982 | Sed-Chr4:11371063 | 9.30E-183 | tandem | |
Sed04g0982 | Sed-Chr4:11371063 | Sed04g0983 | Sed-Chr4:11371063 | 2.10E-231 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed04g0982 | K01102 | - | csv:101220137 | 713.761 |