Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g1045 ATGTCTGTTTTTTATGTCTGTGTTTGCCTTCTTTTTGGTGGCGCCACCCCTCTTGGTTCCGCCGGCAGCGGCGACCGCGGCTCGAGGCTGCTGGATAATACACCCACATGGGCAGTTGCTGGTGTTTGTTTCTTTTTCATTGTTATTTCCATTGTATTGGAAAAAGTTCTTCACAAAGTTGGAACATGGTTGGCAGAAAAGCATAAGAGTTCTCTGTTTGAAGCTCTGGAGAAGGTTAAGGCTGAGCTGATGATTTTGGGTTTCATTTCCCTGCTTCTGACCTTTGCACAAGCTTATATAGTCCAAATATGCATTCCTCAAGCCATTGCAAACACCATGTTGCCTTGTCCCCTTGAAGGAAAAAATGACTCGCCATCTACAAACGGTGAAGGCAAGCATCACCGGAGGCTTCCATGGCTAATTCGAAGATCGTTGGCCGGAGGCCATAATGTCGCCCCGTGTAAGGATGGTAAAGTGTCTCTTATATCTATTGATGGATTGCATCAGTTACACATTCTCATATTCTTCCTAGCTGTGTTTCATGTGCTCTTTAGTGTTACCACAATGACACTTGGAAGAGCAAAGATTCGAGGCTGGAAGGAATGGGAGCAGGAAACTTCAACCCATAAGTATGAGTTTTTCAATGATCCTGCAAGATTTAGGCTTACTCATGAGACATCTTTTGTGAAAGCGCACACAAGCTTCTGGACACGTCTTCCTTTCTTCTTCTATATCGGCTGCTTCTTCAGGCAATTTTATGGATCTGTTAGTAAGGCCGATTACTTGACGCTACGAAACGGATTCATAACAGTTCATTTAGCACCAGGAAGTAAATTTAACTTCCAAAGGTATATCAAGAGGTCATTAGAAGACGACTTCAAGGTAGTCGTCGGTGTGAGTCCTGTTTTGTGGTTGTCATTTGTGATCTTCATGTTCCTTAATGTAGCTGGATGGAAGACTTCGTTCGGGGCATCGTTTATCCCTCTGATTATTATCTTAGCTGTTGGATCAAAACTTCAAGCCATTTTGACATCTATGGCTCTTGAAATCTCTGAGAAACAGGCAGTGGTCCAGGGAATTCCTCTCGTGCAAGGATCTGACAAATACTTCTGGTTCGGTCGACCGCAACTGATTCTTGATCTCATGCATTGTGCTTTATTTCAGAATGCATTCCTGACCACCTTTAGTTTGACTGCACTGTATTCTTTTGAGCCAAATTCTTGCTTCTCTAAGGCTCCTCTCATCGTTAGCATTATAAAATTCAGTATTGGAGTTGCAACATTATCTCTATGCAGCTACGTTACGCTTCCGATCTACGCCCTTGTAACTCAGATGGGGTCGGGCATGAAGAAGTCCATCTTTGACGAACAGACATCGAAGGCGCTCAAGAAATGGCATGAAACAGCAAAGAAGAAGCGGGTTCAACTAGCCTCGGAAACTAAAACACCTGAAGGTAGTTTAAATGCTTCACCTCTATGCTTGTTCGGACATTCGTTGCAACGGTTCAAAACCATAGGACATTCCATGCATTTACCTGCATATGAGGACCTTGAGTCATCTGATTATGAGGGTGATCCGTTAGCAACGCCTACACAAGCATCAACTATCGAATCGATTAATGTCGATATGGATGACGAGGAAATACACGAAATTGATGACACAGACCAGCCCAAAACTAAAGAAGGAGATGAGTTCTCTCATTTATAA 1707 43.29 MSVFYVCVCLLFGGATPLGSAGSGDRGSRLLDNTPTWAVAGVCFFFIVISIVLEKVLHKVGTWLAEKHKSSLFEALEKVKAELMILGFISLLLTFAQAYIVQICIPQAIANTMLPCPLEGKNDSPSTNGEGKHHRRLPWLIRRSLAGGHNVAPCKDGKVSLISIDGLHQLHILIFFLAVFHVLFSVTTMTLGRAKIRGWKEWEQETSTHKYEFFNDPARFRLTHETSFVKAHTSFWTRLPFFFYIGCFFRQFYGSVSKADYLTLRNGFITVHLAPGSKFNFQRYIKRSLEDDFKVVVGVSPVLWLSFVIFMFLNVAGWKTSFGASFIPLIIILAVGSKLQAILTSMALEISEKQAVVQGIPLVQGSDKYFWFGRPQLILDLMHCALFQNAFLTTFSLTALYSFEPNSCFSKAPLIVSIIKFSIGVATLSLCSYVTLPIYALVTQMGSGMKKSIFDEQTSKALKKWHETAKKKRVQLASETKTPEGSLNASPLCLFGHSLQRFKTIGHSMHLPAYEDLESSDYEGDPLATPTQASTIESINVDMDDEEIHEIDDTDQPKTKEGDEFSHL 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 14441100 14445518 + Sed0025426.1 Sed04g1045 709648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g1045 568 Pfam Mlo family 29 490 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed04g1045 568 MobiDBLite consensus disorder prediction 525 539 - -
Sed04g1045 568 MobiDBLite consensus disorder prediction 552 568 - -
Sed04g1045 568 PANTHER MLO-LIKE PROTEIN 1 25 485 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed04g1045 568 MobiDBLite consensus disorder prediction 521 568 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0209 Sed-Chr2:34503770 Sed04g1045 Sed-Chr4:14441100 7.10E-233 dispersed
Sed04g1045 Sed-Chr4:14441100 Sed10g0516 Sed-Chr10:3360296 9.90E-182 dispersed
Sed04g1045 Sed-Chr4:14441100 Sed14g1259 Sed-Chr14:21668597 4.10E-188 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g1045 K08472 - csv:116402632 874.389