Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sed04g1560	ATGAGTTCAGCAAATTGTTTTTGGACAATATTCAAGCAACGGAAGGTGAAACATGTTACAAGCAATGGAGAACAGGTACATGTAGAGACAGGAAAAATCAATGGTTCTCCAAATGGAAAGAGGGAAGATCTAGCTGCAACTCGAATTCAAAATGCATTCCAGGCATTTACGGCCAGAAAGATTGTACATAATCCGAAAGGGCCAGAGAGATGCCAGGATCTAATTCAAGGTGAAGCAGCTACAAAACAAGTGTTAAACTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAGCACGTAGACTCTGTATGGTTACAGAATATCGAGTCAAGCAAAAGAAACTGGAAAATCAGCTGAAACTTGAGGCTAAAATTCATGAACTTGAGGAAGAATGGTGTGGTGGGTCTGAAACAAAGGAGGGAATACTTTTCAAGATTCAGCAACGAGAAGAAGCTGCTGTCAAACGGGAGCGAGCCATGGCATATGCTTTCTCTCATCAGTGGAGGGCTAACTCCATCTTAGATCTAAGTCCGGCTTCATACAGCCTTGACAAAGAACACTGGGGCTGGAGCTGGAAGGAGAGATGGATTGCTGCTCGGCCTTGGGAGATACGAGCTAATACTCATCCCACCATTCCGAAGAAGGTTCAGACAAAGCAAACAAGCAAACTCAATAAAGTGACACATCAACCGGGGTCGAAGTTCTCAAACTCAGCCAAACATTCTTCATCAAACAGCAAGGGGAGTTCAAAGGCCAGAAAATATGCTATACCCAACTGCTGA	786	43.38	MSSANCFWTIFKQRKVKHVTSNGEQVHVETGKINGSPNGKREDLAATRIQNAFQAFTARKIVHNPKGPERCQDLIQGEAATKQVLNFIHSWSRMQQEIRARRLCMVTEYRVKQKKLENQLKLEAKIHELEEEWCGGSETKEGILFKIQQREEAAVKRERAMAYAFSHQWRANSILDLSPASYSLDKEHWGWSWKERWIAARPWEIRANTHPTIPKKVQTKQTSKLNKVTHQPGSKFSNSAKHSSSNSKGSSKARKYAIPNC	261

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
4	30362242	30370030	-	Sed0010652.1	Sed04g1560	710163

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sed04g1560	261	PANTHER	IQ-DOMAIN 5-RELATED	30	247	-	-
	Sed04g1560	261	Coils	Coil	112	132	-	-
	Sed04g1560	261	MobiDBLite	consensus disorder prediction	212	253	-	-
	Sed04g1560	261	MobiDBLite	consensus disorder prediction	209	261	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Sed04g1560	Sed-Chr4:30362242	Sed14g1502	Sed-Chr14:23347089	1.00E-56	dispersed
	Sed04g1560	Sed-Chr4:30362242	Sed10g0264	Sed-Chr10:1532884	1.50E-60	transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sed04g1560	-		-	-	0.0