Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g1597 ATGGAGCTCCAAGAAGGACGGTCTCTGGCCGAGACGCCGACCTACTCGGTTGCTTCTGTCGTTACTGTCATGGTCTTCGTTTGCTTTGTGGTAGAGCGCGCAATCTACAGATTTGGAAAGTGGTTGAAGAAAACCAAGAGAAAGGCTCTGTTTGTTTCTTTGGAGAAGATCAAGGAAGAGCTGATGCTGCTTGGACTAATATCTTTGATGCTGGCACAATGTGCTAGGTGGATCTCCGAAATTTGTGTGAGCTCGTCCCTTATGACCAGTAGATTCTACATTTGTTCAGAAGAAGATTATGCAACCAATGAACATGTTACGATTGGACGTTCTCGTTTATCTTCTAACGAATCCGGCATTCCTCTGAGAGGATTAAGTGCTCTCCCCCATCAATGTGGTGAGGGTCGCGAGCCTTTTGTTTCGTATGAGGGACTCGAACAACTTCATCGCTTCTTATTCGTTCTTGGGATCACTCATGTTCTTTATAGTTGTCTTGCAGTTGGTCTGGCTATGAGTAAGATATACAGTTGGAGGAAATGGGAAAATCAAGTTAAGTTAGCTGCTGAGGAAAATTGGAAAGCTAAAATAAATAAGGTGATGAGGCGTCAAACGACATTCGTATTCCATCACACATCTCATCCATGGAGTAGGAGTCGTTTTCTCATATGGATGCTTTGTTTTCTACGTCAGTTCAAGAGTTCAATAAAAAAATCAGACTATTTGGCCCTCCGTTTGGGATTCATTTTGAAGCACAAACTACCGTTTTCTTATGATTTCCACAAGTACATGGTTCGGAGCATGGAAGACGAGTTCCAGGGAATCCTTGGAATCAGCTTCCCGCTATGGGGCTACGCCATTCTTTGCATCTTTGTCAACATTCATGGCTTAAACATCTACTTTTGGCTTTCGTTTATACCGGCCGCACTTGTCATGCTGGTTGGGACAAAACTTCAACATGTAGTCTCCTCTTTGGCGCTGGAAGTTCTGGGACAAACCGGTCCGGCAGCAATCGGGACTCAAATAAAGCCAAGAGATGGTCTATTTTGGTTTGGAAAGCCTGAGATATTACTACGGTTAATACAGTTCATCATATTTCAGAATGCATTCGAGATGGCGACATTTATCTGGTCCTTGTGGGGATTTAAGGAGAGATCTTGCTTCATGAAGAATGACTTTATGATTATCACACGGCTGACTTCTGGTGTTTTTGTTCAGTTTTGGTGCAGCTACAGCACTGTGCCACTTAATGTAATTGTTACACAGATGGGATCCAAGTGTAAGAAAGCATTGGTTGCTGAGAGTGTGAGAGAGTCACTGCATAGTTGGTGCAAGAGAGTAAAGGAGAGGTCCAAACGTGACTCTGCACAGTCTGTCACCACAAGATCTGTATGTTCCCTTGAATCGCTGGTTGACGAGCGCGATGAAATAACAGTTGCATCGGGTACGTTGTCACGGAGCACTTCTTTCGACACTTTGAATCAGGTGACGATACAGTCTTCAACACAACTGGAGGCCATTATTGAGTCTTCAAGCTTTAGGAAGCATGAACTTCCCCTCACTATGGTGGATTATCTATCACAATCTGCTAGTGTTTCTGCTGCTCCTGCTAATGGCCAAGAAAATCATGCTGAAAGTGGAGACGATAGCAAGGTCGAGTCGCTTTTCGACTTGTTCCGAAGGACATGA 1686 44.07 MELQEGRSLAETPTYSVASVVTVMVFVCFVVERAIYRFGKWLKKTKRKALFVSLEKIKEELMLLGLISLMLAQCARWISEICVSSSLMTSRFYICSEEDYATNEHVTIGRSRLSSNESGIPLRGLSALPHQCGEGREPFVSYEGLEQLHRFLFVLGITHVLYSCLAVGLAMSKIYSWRKWENQVKLAAEENWKAKINKVMRRQTTFVFHHTSHPWSRSRFLIWMLCFLRQFKSSIKKSDYLALRLGFILKHKLPFSYDFHKYMVRSMEDEFQGILGISFPLWGYAILCIFVNIHGLNIYFWLSFIPAALVMLVGTKLQHVVSSLALEVLGQTGPAAIGTQIKPRDGLFWFGKPEILLRLIQFIIFQNAFEMATFIWSLWGFKERSCFMKNDFMIITRLTSGVFVQFWCSYSTVPLNVIVTQMGSKCKKALVAESVRESLHSWCKRVKERSKRDSAQSVTTRSVCSLESLVDERDEITVASGTLSRSTSFDTLNQVTIQSSTQLEAIIESSSFRKHELPLTMVDYLSQSASVSAAPANGQENHAESGDDSKVESLFDLFRRT 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 30737466 30743462 + Sed0012752.1 Sed04g1597 710200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g1597 561 MobiDBLite consensus disorder prediction 530 553 - -
Sed04g1597 561 Pfam Mlo family 6 463 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed04g1597 561 PANTHER MLO-LIKE PROTEIN 1 3 473 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0956 Sed-Chr4:11092018 Sed04g1597 Sed-Chr4:30737466 1.30E-113 dispersed
Sed04g0957 Sed-Chr4:11092018 Sed04g1597 Sed-Chr4:30737466 1.00E-119 dispersed
Sed04g1597 Sed-Chr4:30737466 Sed04g3117 Sed-Chr4:42019245 4.20E-124 dispersed
Sed04g1597 Sed-Chr4:30737466 Sed03g0155 Sed-Chr3:956509 1.40E-124 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g1597 K08472 - csv:101204236 954.51