Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g1597 ATGGAGCTCCAAGAAGGACGGTCTCTGGCCGAGACGCCGACCTACTCGGTTGCTTCTGTCGTTACTGTCATGGTCTTCGTTTGCTTTGTGGTAGAGCGCGCAATCTACAGATTTGGAAAGTGGTTGAAGAAAACCAAGAGAAAGGCTCTGTTTGTTTCTTTGGAGAAGATCAAGGAAGAGCTGATGCTGCTTGGACTAATATCTTTGATGCTGGCACAATGTGCTAGGTGGATCTCCGAAATTTGTGTGAGCTCGTCCCTTATGACCAGTAGATTCTACATTTGTTCAGAAGAAGATTATGCAACCAATGAACATGTTACGATTGGACGTTCTCGTTTATCTTCTAACGAATCCGGCATTCCTCTGAGAGGATTAAGTGCTCTCCCCCATCAATGTGGTGAGGGTCGCGAGCCTTTTGTTTCGTATGAGGGACTCGAACAACTTCATCGCTTCTTATTCGTTCTTGGGATCACTCATGTTCTTTATAGTTGTCTTGCAGTTGGTCTGGCTATGAGTAAGATATACAGTTGGAGGAAATGGGAAAATCAAGTTAAGTTAGCTGCTGAGGAAAATTGGAAAGCTAAAATAAATAAGGTGATGAGGCGTCAAACGACATTCGTATTCCATCACACATCTCATCCATGGAGTAGGAGTCGTTTTCTCATATGGATGCTTTGTTTTCTACGTCAGTTCAAGAGTTCAATAAAAAAATCAGACTATTTGGCCCTCCGTTTGGGATTCATTTTGAAGCACAAACTACCGTTTTCTTATGATTTCCACAAGTACATGGTTCGGAGCATGGAAGACGAGTTCCAGGGAATCCTTGGAATCAGCTTCCCGCTATGGGGCTACGCCATTCTTTGCATCTTTGTCAACATTCATGGCTTAAACATCTACTTTTGGCTTTCGTTTATACCGGCCGCACTTGTCATGCTGGTTGGGACAAAACTTCAACATGTAGTCTCCTCTTTGGCGCTGGAAGTTCTGGGACAAACCGGTCCGGCAGCAATCGGGACTCAAATAAAGCCAAGAGATGGTCTATTTTGGTTTGGAAAGCCTGAGATATTACTACGGTTAATACAGTTCATCATATTTCAGAATGCATTCGAGATGGCGACATTTATCTGGTCCTTGTGGGGATTTAAGGAGAGATCTTGCTTCATGAAGAATGACTTTATGATTATCACACGGCTGACTTCTGGTGTTTTTGTTCAGTTTTGGTGCAGCTACAGCACTGTGCCACTTAATGTAATTGTTACACAGATGGGATCCAAGTGTAAGAAAGCATTGGTTGCTGAGAGTGTGAGAGAGTCACTGCATAGTTGGTGCAAGAGAGTAAAGGAGAGGTCCAAACGTGACTCTGCACAGTCTGTCACCACAAGATCTGTATGTTCCCTTGAATCGCTGGTTGACGAGCGCGATGAAATAACAGTTGCATCGGGTACGTTGTCACGGAGCACTTCTTTCGACACTTTGAATCAGGTGACGATACAGTCTTCAACACAACTGGAGGCCATTATTGAGTCTTCAAGCTTTAGGAAGCATGAACTTCCCCTCACTATGGTGGATTATCTATCACAATCTGCTAGTGTTTCTGCTGCTCCTGCTAATGGCCAAGAAAATCATGCTGAAAGTGGAGACGATAGCAAGGTCGAGTCGCTTTTCGACTTGTTCCGAAGGACATGA 1686 44.07 MELQEGRSLAETPTYSVASVVTVMVFVCFVVERAIYRFGKWLKKTKRKALFVSLEKIKEELMLLGLISLMLAQCARWISEICVSSSLMTSRFYICSEEDYATNEHVTIGRSRLSSNESGIPLRGLSALPHQCGEGREPFVSYEGLEQLHRFLFVLGITHVLYSCLAVGLAMSKIYSWRKWENQVKLAAEENWKAKINKVMRRQTTFVFHHTSHPWSRSRFLIWMLCFLRQFKSSIKKSDYLALRLGFILKHKLPFSYDFHKYMVRSMEDEFQGILGISFPLWGYAILCIFVNIHGLNIYFWLSFIPAALVMLVGTKLQHVVSSLALEVLGQTGPAAIGTQIKPRDGLFWFGKPEILLRLIQFIIFQNAFEMATFIWSLWGFKERSCFMKNDFMIITRLTSGVFVQFWCSYSTVPLNVIVTQMGSKCKKALVAESVRESLHSWCKRVKERSKRDSAQSVTTRSVCSLESLVDERDEITVASGTLSRSTSFDTLNQVTIQSSTQLEAIIESSSFRKHELPLTMVDYLSQSASVSAAPANGQENHAESGDDSKVESLFDLFRRT 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 30737466 30743462 + Sed0012752.1 Sed04g1597 710200

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g1597 561 MobiDBLite consensus disorder prediction 530 553 - -
Sed04g1597 561 Pfam Mlo family 6 463 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed04g1597 561 PANTHER MLO-LIKE PROTEIN 1 3 473 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g1597 K08472 - - csv:101204236 954.51
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0956 Sed-Chr4:11092018 Sed04g1597 Sed-Chr4:30737466 1.30E-113 dispersed
Sed04g0957 Sed-Chr4:11092018 Sed04g1597 Sed-Chr4:30737466 1.00E-119 dispersed
Sed04g1597 Sed-Chr4:30737466 Sed04g3117 Sed-Chr4:42019245 4.20E-124 dispersed
Sed04g1597 Sed-Chr4:30737466 Sed03g0155 Sed-Chr3:956509 1.40E-124 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi12g1097 . . . . . . . . . . . . . . Sed04g1597 Cpe01g00825 Cpe14g00681 Bhi01g01590 Tan01g0784 Cmetu04g0308 . Hepe07g0512 Mch10g0552 . Cla05g01024 Cam05g1118 Cec05g1128 Cco05g1118 Clacu05g1109 Cmu05g1058 Cre05g1133 . . . . . . . Cme06g01218 . . . . . . . . . Cmo04g00973 . . . . . . . . . . . . . . . . . . . . . Lsi05g00163 . . .
Vvi19g246 Blo03g00649 Blo03g01542 Bda07g00291 . . Bpe08g01029 . . . . Cma01g01204 Cma09g00875 Car01g01028 Car09g00788 Sed04g1597 Cpe06g00699 . Bhi09g03403 Tan01g0784 Cmetu04g0308 . . . . Cla11g01772 Cam11g1837 Cec11g1858 Cco11g1866 Clacu11g1998 Cmu11g1807 Cre11g2216 Cone6ag0137 Cone9ag0162 . . Lsi04g01324 Csa04g02353 Chy07g00085 . . . . . Bpe11g00487 . Bma07g01182 . . Cmo01g01256 Cmo09g00864 Cma04g00535 . Car04g00505 . . . . . . . . . . Cla05g01024 Cam05g1118 Cec05g1128 Cco05g1118 Clacu05g1109 Cmu05g1058 Cre05g1133 . . Chy06g01139 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Sed03g0155 . 3 553 MLO family AT5G53760 68.6 1.3e-213 740.3
Sed11g1950 . 3 534 MLO family AT5G53760 70.6 1.6e-211 733.4
Sed04g3117 . 10 516 MLO family AT5G53760 72.3 3.5e-211 732.3
Sed04g3117 . 1 502 MLO family AT1G26700 72.2 2.2e-210 729.6
Sed03g0155 . 3 553 MLO family AT1G26700 67.8 7.9e-208 721.1
Sed11g1950 . 3 554 MLO family AT1G26700 67.5 8.1e-205 711.1
Sed04g2611 . 7 495 MLO family AT2G39200 67.8 5.5e-196 681.8
Sed07g2279 . 7 496 MLO family AT2G39200 66.4 2.7e-195 679.5
Sed01g0995 . 8 506 MLO family AT2G39200 66.1 1.0e-189 661.0
Sed05g2862 . 8 503 MLO family AT2G39200 67.1 3.2e-188 656.0
Sed05g2862 . 8 414 MLO family AT1G61560 68.0 1.4e-161 567.0
Sed01g0995 . 8 416 MLO family AT1G61560 67.0 2.1e-157 553.1
Sed04g2611 . 7 404 MLO family AT1G61560 65.7 6.8e-156 548.1
Sed07g2279 . 7 404 MLO family AT1G61560 64.5 5.1e-151 531.9
Sed14g1259 . 28 422 MLO family AT1G61560 52.7 2.6e-115 413.3
Sed10g0516 . 30 423 MLO family AT1G61560 51.5 1.7e-114 410.6
Sed08g1856 . 10 413 MLO family AT1G61560 50.5 2.7e-112 403.3
Sed10g0516 . 20 496 MLO family AT2G17430 63.8 2.9e-170 596.3
Sed14g1259 . 19 480 MLO family AT2G17430 62.6 1.1e-166 584.3
Sed02g0209 . 2 470 MLO family AT2G17430 61.7 1.0e-151 534.6
Sed08g1856 . 2 482 MLO family AT2G17430 57.8 7.3e-150 528.5
Sed04g1045 . 13 473 MLO family AT2G17430 60.9 2.8e-149 526.6
Sed01g0995 . 3 458 MLO family AT2G17430 51.8 2.1e-125 447.2
Sed02g0061 . 1 267 MLO family AT2G17430 60.5 2.8e-93 340.5
Sed14g1259 . 6 567 MLO family AT2G17480 62.8 2.5e-196 682.9
Sed10g0516 . 30 573 MLO family AT2G17480 63.1 2.9e-192 669.5
Sed04g1045 . 9 525 MLO family AT2G17480 61.1 2.5e-167 586.6
Sed02g0209 . 7 515 MLO family AT2G17480 62.3 1.2e-166 584.3
Sed08g1856 . 12 482 MLO family AT2G17480 61.6 6.5e-160 562.0
Sed01g0995 . 8 463 MLO family AT2G17480 52.2 9.5e-127 451.8
Sed05g2862 . 8 461 MLO family AT2G17480 51.5 3.6e-126 449.9
Sed02g0061 . 1 359 MLO family AT2G17480 55.4 1.1e-106 385.2
Sed08g1856 . 12 378 MLO family AT1G42560 62.8 3.1e-131 466.1
Sed14g1259 . 28 386 MLO family AT1G42560 58.7 5.5e-120 428.7
Sed10g0516 . 30 387 MLO family AT1G42560 58.7 2.1e-119 426.8
Sed04g1045 . 26 388 MLO family AT1G42560 56.1 6.8e-110 395.2
Sed02g0209 . 7 367 MLO family AT1G42560 56.0 3.4e-109 392.9
Sed01g0995 . 6 381 MLO family AT1G42560 50.4 8.1e-95 345.1
Sed02g0061 . 1 171 MLO family AT1G42560 52.3 6.2e-55 212.6
Sed04g2149 . 6 419 MLO family AT4G24250 53.2 3.7e-114 409.5
Sed09g0123 . 1 413 MLO family AT4G24250 53.5 2.9e-111 399.8
Sed01g3136 . 1 353 MLO family AT4G24250 52.6 8.0e-93 338.6
Sed10g0516 . 14 388 MLO family AT5G65970 65.6 6.5e-142 501.9
Sed14g1259 . 8 387 MLO family AT5G65970 64.2 7.9e-140 495.0
Sed02g0209 . 3 367 MLO family AT5G65970 66.0 4.8e-137 485.7
Sed04g1045 . 7 388 MLO family AT5G65970 63.6 3.4e-135 479.6
Sed08g1856 . 9 378 MLO family AT5G65970 59.0 8.2e-121 431.8
Sed01g0995 . 2 381 MLO family AT5G65970 51.3 9.2e-104 375.2
Sed05g2862 . 2 379 MLO family AT5G65970 50.8 5.9e-103 372.5
Sed02g0061 . 1 171 MLO family AT5G65970 64.3 2.4e-72 270.8
Sed08g1856 . 2 468 MLO family AT2G33670 66.7 2.3e-174 609.8
Sed10g0516 . 22 471 MLO family AT2G33670 61.3 8.8e-158 554.7
Sed14g1259 . 28 492 MLO family AT2G33670 60.4 8.8e-158 554.7
Sed04g1045 . 27 472 MLO family AT2G33670 56.5 1.2e-133 474.6
Sed02g0209 . 2 458 MLO family AT2G33670 54.9 1.4e-131 467.6
Sed05g2862 . 1 481 MLO family AT2G33670 50.2 5.9e-130 462.2
Sed01g0995 . 6 482 MLO family AT2G33670 50.5 1.9e-128 457.2
Sed02g0061 . 1 255 MLO family AT2G33670 53.7 1.9e-80 297.7
Sed04g2611 . 64 521 MLO family AT1G11310 63.7 2.0e-173 606.7
Sed07g2279 . 64 567 MLO family AT1G11310 59.0 1.6e-167 587.0
Sed05g2862 . 63 526 MLO family AT1G11310 62.7 3.5e-162 569.3
Sed01g0995 . 63 509 MLO family AT1G11310 64.4 3.5e-162 569.3
Sed14g1259 . 83 468 MLO family AT1G11310 50.7 3.6e-106 383.3
Sed08g1856 . 67 458 MLO family AT1G11310 51.6 2.3e-105 380.6
Sed04g2149 . 1 501 MLO family AT2G44110 59.3 1.8e-166 583.6
Sed09g0123 . 1 495 MLO family AT2G44110 59.2 1.3e-161 567.4
Sed01g3136 . 1 434 MLO family AT2G44110 56.8 2.7e-135 479.9
Sed04g2149 . 1 510 MLO family AT4G02600 70.1 1.5e-208 723.4
Sed09g0123 . 1 479 MLO family AT4G02600 73.3 1.9e-203 706.4
Sed01g3136 . 1 419 MLO family AT4G02600 69.4 8.1e-170 594.7
Sed04g1597 . 3 561 MLO family AT1G11000 67.0 3.2e-212 735.7
Sed04g0955 . 1 458 MLO family AT1G11000 54.5 3.6e-131 466.5
Sed04g0957 . 1 403 MLO family AT1G11000 54.1 3.7e-112 403.3
Sed04g0956 . 1 378 MLO family AT1G11000 54.5 9.9e-105 378.6
Sed04g2149 . 1 510 MLO family AT4G02600 70.1 1.5e-208 723.4
Sed09g0123 . 1 479 MLO family AT4G02600 73.3 1.9e-203 706.4
Sed01g3136 . 1 419 MLO family AT4G02600 69.4 8.1e-170 594.7
Sed04g2611 . 64 521 MLO family AT1G11310 63.7 2.0e-173 606.7
Sed07g2279 . 64 567 MLO family AT1G11310 59.0 1.6e-167 587.0
Sed05g2862 . 63 526 MLO family AT1G11310 62.7 3.5e-162 569.3
Sed01g0995 . 63 509 MLO family AT1G11310 64.4 3.5e-162 569.3
Sed14g1259 . 83 468 MLO family AT1G11310 50.7 3.6e-106 383.3
Sed08g1856 . 67 458 MLO family AT1G11310 51.6 2.3e-105 380.6
Sed04g1597 . 3 561 MLO family AT1G11000 67.0 3.2e-212 735.7
Sed04g0955 . 1 458 MLO family AT1G11000 54.5 3.6e-131 466.5
Sed04g0957 . 1 403 MLO family AT1G11000 54.1 3.7e-112 403.3
Sed04g0956 . 1 378 MLO family AT1G11000 54.5 9.9e-105 378.6
Sed08g1856 . 2 468 MLO family AT2G33670 66.7 2.3e-174 609.8
Sed10g0516 . 22 471 MLO family AT2G33670 61.3 8.8e-158 554.7
Sed14g1259 . 28 492 MLO family AT2G33670 60.4 8.8e-158 554.7
Sed04g1045 . 27 472 MLO family AT2G33670 56.5 1.2e-133 474.6
Sed02g0209 . 2 458 MLO family AT2G33670 54.9 1.4e-131 467.6
Sed05g2862 . 1 481 MLO family AT2G33670 50.2 5.9e-130 462.2
Sed01g0995 . 6 482 MLO family AT2G33670 50.5 1.9e-128 457.2
Sed02g0061 . 1 255 MLO family AT2G33670 53.7 1.9e-80 297.7
Sed05g2862 . 8 414 MLO family AT1G61560 68.0 1.4e-161 567.0
Sed01g0995 . 8 416 MLO family AT1G61560 67.0 2.1e-157 553.1
Sed04g2611 . 7 404 MLO family AT1G61560 65.7 6.8e-156 548.1
Sed07g2279 . 7 404 MLO family AT1G61560 64.5 5.1e-151 531.9
Sed14g1259 . 28 422 MLO family AT1G61560 52.7 2.6e-115 413.3
Sed10g0516 . 30 423 MLO family AT1G61560 51.5 1.7e-114 410.6
Sed08g1856 . 10 413 MLO family AT1G61560 50.5 2.7e-112 403.3
Sed10g0516 . 20 496 MLO family AT2G17430 63.8 2.9e-170 596.3
Sed14g1259 . 19 480 MLO family AT2G17430 62.6 1.1e-166 584.3
Sed02g0209 . 2 470 MLO family AT2G17430 61.7 1.0e-151 534.6
Sed08g1856 . 2 482 MLO family AT2G17430 57.8 7.3e-150 528.5
Sed04g1045 . 13 473 MLO family AT2G17430 60.9 2.8e-149 526.6
Sed01g0995 . 3 458 MLO family AT2G17430 51.8 2.1e-125 447.2
Sed02g0061 . 1 267 MLO family AT2G17430 60.5 2.8e-93 340.5
Sed14g1259 . 6 567 MLO family AT2G17480 62.8 2.5e-196 682.9
Sed10g0516 . 30 573 MLO family AT2G17480 63.1 2.9e-192 669.5
Sed04g1045 . 9 525 MLO family AT2G17480 61.1 2.5e-167 586.6
Sed02g0209 . 7 515 MLO family AT2G17480 62.3 1.2e-166 584.3
Sed08g1856 . 12 482 MLO family AT2G17480 61.6 6.5e-160 562.0
Sed01g0995 . 8 463 MLO family AT2G17480 52.2 9.5e-127 451.8
Sed05g2862 . 8 461 MLO family AT2G17480 51.5 3.6e-126 449.9
Sed02g0061 . 1 359 MLO family AT2G17480 55.4 1.1e-106 385.2
Sed08g1856 . 12 378 MLO family AT1G42560 62.8 3.1e-131 466.1
Sed14g1259 . 28 386 MLO family AT1G42560 58.7 5.5e-120 428.7
Sed10g0516 . 30 387 MLO family AT1G42560 58.7 2.1e-119 426.8
Sed04g1045 . 26 388 MLO family AT1G42560 56.1 6.8e-110 395.2
Sed02g0209 . 7 367 MLO family AT1G42560 56.0 3.4e-109 392.9
Sed01g0995 . 6 381 MLO family AT1G42560 50.4 8.1e-95 345.1
Sed02g0061 . 1 171 MLO family AT1G42560 52.3 6.2e-55 212.6
Sed10g0516 . 14 388 MLO family AT5G65970 65.6 6.5e-142 501.9
Sed14g1259 . 8 387 MLO family AT5G65970 64.2 7.9e-140 495.0
Sed02g0209 . 3 367 MLO family AT5G65970 66.0 4.8e-137 485.7
Sed04g1045 . 7 388 MLO family AT5G65970 63.6 3.4e-135 479.6
Sed08g1856 . 9 378 MLO family AT5G65970 59.0 8.2e-121 431.8
Sed01g0995 . 2 381 MLO family AT5G65970 51.3 9.2e-104 375.2
Sed05g2862 . 2 379 MLO family AT5G65970 50.8 5.9e-103 372.5
Sed02g0061 . 1 171 MLO family AT5G65970 64.3 2.4e-72 270.8
Sed03g0155 . 3 553 MLO family AT5G53760 68.6 1.3e-213 740.3
Sed11g1950 . 3 534 MLO family AT5G53760 70.6 1.6e-211 733.4
Sed04g3117 . 10 516 MLO family AT5G53760 72.3 3.5e-211 732.3
Sed04g2611 . 7 495 MLO family AT2G39200 67.8 5.5e-196 681.8
Sed07g2279 . 7 496 MLO family AT2G39200 66.4 2.7e-195 679.5
Sed01g0995 . 8 506 MLO family AT2G39200 66.1 1.0e-189 661.0
Sed05g2862 . 8 503 MLO family AT2G39200 67.1 3.2e-188 656.0
Sed04g2149 . 6 419 MLO family AT4G24250 53.2 3.7e-114 409.5
Sed09g0123 . 1 413 MLO family AT4G24250 53.5 2.9e-111 399.8
Sed01g3136 . 1 353 MLO family AT4G24250 52.6 8.0e-93 338.6
Sed04g3117 . 1 502 MLO family AT1G26700 72.2 2.2e-210 729.6
Sed03g0155 . 3 553 MLO family AT1G26700 67.8 7.9e-208 721.1
Sed11g1950 . 3 554 MLO family AT1G26700 67.5 8.1e-205 711.1
Sed04g2149 . 1 501 MLO family AT2G44110 59.3 1.8e-166 583.6
Sed09g0123 . 1 495 MLO family AT2G44110 59.2 1.3e-161 567.4
Sed01g3136 . 1 434 MLO family AT2G44110 56.8 2.7e-135 479.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011947 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 30